Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MTND1P4-201ENST00000435196 415 ntBASIC1.16□□□□□ -2.22
SRP54P61011 MTND3P10-201ENST00000450967 341 ntBASIC1.16□□□□□ -2.22
SRP54P61011 COX6CP14-201ENST00000469580 174 ntBASIC1.16□□□□□ -2.22
SRP54P61011 RPL7P42-201ENST00000481005 679 ntBASIC1.16□□□□□ -2.22
SRP54P61011 AL133373.1-201ENST00000497098 94 ntBASIC1.16□□□□□ -2.22
SRP54P61011 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.16□□□□□ -2.22
SRP54P61011 RNU6-1278P-201ENST00000516130 107 ntBASIC1.16□□□□□ -2.22
SRP54P61011 RNU2-56P-201ENST00000516826 190 ntBASIC1.16□□□□□ -2.22
SRP54P61011 RNU6-165P-201ENST00000517170 99 ntBASIC1.16□□□□□ -2.22
SRP54P61011 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.16□□□□□ -2.22
SRP54P61011 MIR6504-201ENST00000613520 61 ntBASIC1.16□□□□□ -2.22
SRP54P61011 AC068647.2-201ENST00000637380 353 ntBASIC1.16□□□□□ -2.22
SRP54P61011 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SRP54P61011 RNU6-199P-201ENST00000362954 107 ntBASIC1.15□□□□□ -2.23
SRP54P61011 RNU6-407P-201ENST00000365280 104 ntBASIC1.15□□□□□ -2.23
SRP54P61011 MIR873-201ENST00000401120 77 ntBASIC1.15□□□□□ -2.23
SRP54P61011 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.15□□□□□ -2.23
SRP54P61011 RNU6-625P-201ENST00000459412 107 ntBASIC1.15□□□□□ -2.23
SRP54P61011 Y_RNA.673-201ENST00000516306 88 ntBASIC1.15□□□□□ -2.23
SRP54P61011 MIR2355-201ENST00000517199 87 ntBASIC1.15□□□□□ -2.23
SRP54P61011 AC022868.1-201ENST00000517767 391 ntBASIC1.15□□□□□ -2.23
SRP54P61011 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.15□□□□□ -2.23
SRP54P61011 AP002004.2-201ENST00000531656 154 ntBASIC1.15□□□□□ -2.23
SRP54P61011 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.15□□□□□ -2.23
SRP54P61011 AC091178.2-201ENST00000584401 117 ntBASIC1.15□□□□□ -2.23
SRP54P61011 AC005828.6-201ENST00000606610 232 ntBASIC1.15□□□□□ -2.23
SRP54P61011 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
SRP54P61011 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.15□□□□□ -2.23
SRP54P61011 AC092794.2-201ENST00000620933 563 ntBASIC1.15□□□□□ -2.23
SRP54P61011 U6.115-201ENST00000636045 103 ntBASIC1.15□□□□□ -2.23
SRP54P61011 AC027514.1-201ENST00000588561 1603 ntBASIC1.15□□□□□ -2.23
SRP54P61011 Y_RNA.358-201ENST00000365491 99 ntBASIC1.14□□□□□ -2.23
SRP54P61011 Y_RNA.404-201ENST00000383978 102 ntBASIC1.14□□□□□ -2.23
SRP54P61011 RNU6-318P-201ENST00000384283 103 ntBASIC1.14□□□□□ -2.23
SRP54P61011 RNU6-424P-201ENST00000384367 105 ntBASIC1.14□□□□□ -2.23
SRP54P61011 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
SRP54P61011 RNU6-376P-201ENST00000384731 106 ntBASIC1.14□□□□□ -2.23
SRP54P61011 MIR653-201ENST00000385279 96 ntBASIC1.14□□□□□ -2.23
SRP54P61011 RAB28P5-201ENST00000427490 651 ntBASIC1.14□□□□□ -2.23
SRP54P61011 AC092423.1-201ENST00000430165 186 ntBASIC1.14□□□□□ -2.23
SRP54P61011 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.14□□□□□ -2.23
SRP54P61011 AL137792.2-201ENST00000443484 235 ntBASIC1.14□□□□□ -2.23
SRP54P61011 U8.22-201ENST00000459141 133 ntBASIC1.14□□□□□ -2.23
SRP54P61011 AC091021.1-201ENST00000468051 388 ntBASIC1.14□□□□□ -2.23
SRP54P61011 RPL17P19-201ENST00000489069 552 ntBASIC1.14□□□□□ -2.23
SRP54P61011 SNORA40.9-201ENST00000515895 93 ntBASIC1.14□□□□□ -2.23
SRP54P61011 RNA5SP168-201ENST00000516642 112 ntBASIC1.14□□□□□ -2.23
SRP54P61011 AC068790.6-201ENST00000602558 258 ntBASIC1.14□□□□□ -2.23
SRP54P61011 AC106754.2-201ENST00000623006 233 ntBASIC1.14□□□□□ -2.23
SRP54P61011 AC139792.2-201ENST00000624218 587 ntBASIC1.14□□□□□ -2.23
SRP54P61011 MIR3674-201ENST00000636576 68 ntBASIC1.14□□□□□ -2.23
SRP54P61011 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
SRP54P61011 SNORD114-7-201ENST00000362520 77 ntBASIC1.13□□□□□ -2.23
SRP54P61011 RNU6-767P-201ENST00000384132 107 ntBASIC1.13□□□□□ -2.23
SRP54P61011 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SRP54P61011 RNA5SP482-201ENST00000391269 118 ntBASIC1.13□□□□□ -2.23
SRP54P61011 SNORA75.4-201ENST00000391278 119 ntBASIC1.13□□□□□ -2.23
SRP54P61011 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SRP54P61011 OR9P1P-201ENST00000496431 281 ntBASIC1.13□□□□□ -2.23
SRP54P61011 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
SRP54P61011 SCARNA16.2-201ENST00000516520 172 ntBASIC1.13□□□□□ -2.23
SRP54P61011 RNU6-922P-201ENST00000516753 99 ntBASIC1.13□□□□□ -2.23
SRP54P61011 AC090049.2-201ENST00000550377 109 ntBASIC1.13□□□□□ -2.23
SRP54P61011 MIR4778-201ENST00000577635 80 ntBASIC1.13□□□□□ -2.23
SRP54P61011 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
SRP54P61011 AL022345.2-201ENST00000606307 135 ntBASIC1.13□□□□□ -2.23
SRP54P61011 GHRLOS.1-201ENST00000610995 70 ntBASIC1.13□□□□□ -2.23
SRP54P61011 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.13□□□□□ -2.23
SRP54P61011 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
SRP54P61011 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SRP54P61011 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.12□□□□□ -2.23
SRP54P61011 SNORA1B-201ENST00000362535 133 ntBASIC1.12□□□□□ -2.23
SRP54P61011 MIR520G-201ENST00000385064 90 ntBASIC1.12□□□□□ -2.23
SRP54P61011 RNA5SP475-201ENST00000410568 110 ntBASIC1.12□□□□□ -2.23
SRP54P61011 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.12□□□□□ -2.23
SRP54P61011 CALM2P4-201ENST00000430810 426 ntBASIC1.12□□□□□ -2.23
SRP54P61011 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
SRP54P61011 RNU6-322P-201ENST00000516010 103 ntBASIC1.12□□□□□ -2.23
SRP54P61011 SNORD116-28-201ENST00000516123 91 ntBASIC1.12□□□□□ -2.23
SRP54P61011 RNU7-30P-201ENST00000516835 62 ntBASIC1.12□□□□□ -2.23
SRP54P61011 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
SRP54P61011 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
SRP54P61011 AL358944.1-201ENST00000528537 144 ntBASIC1.12□□□□□ -2.23
SRP54P61011 AP002001.1-203ENST00000534002 267 ntBASIC1.12□□□□□ -2.23
SRP54P61011 AC084782.3-201ENST00000612282 578 ntBASIC1.12□□□□□ -2.23
SRP54P61011 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SRP54P61011 Y_RNA.166-201ENST00000363730 102 ntBASIC1.11□□□□□ -2.23
SRP54P61011 Y_RNA.191-201ENST00000363972 113 ntBASIC1.11□□□□□ -2.23
SRP54P61011 Y_RNA.267-201ENST00000364679 109 ntBASIC1.11□□□□□ -2.23
SRP54P61011 RNU6-117P-201ENST00000365415 107 ntBASIC1.11□□□□□ -2.23
SRP54P61011 RNU6-1310P-201ENST00000384153 107 ntBASIC1.11□□□□□ -2.23
SRP54P61011 RNU6-192P-201ENST00000391253 100 ntBASIC1.11□□□□□ -2.23
SRP54P61011 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
SRP54P61011 RNU5A-5P-201ENST00000411054 116 ntBASIC1.11□□□□□ -2.23
SRP54P61011 RPL23AP50-201ENST00000434149 455 ntBASIC1.11□□□□□ -2.23
SRP54P61011 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
SRP54P61011 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
SRP54P61011 AC105758.1-201ENST00000506038 399 ntBASIC1.11□□□□□ -2.23
SRP54P61011 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.11□□□□□ -2.23
SRP54P61011 BX284668.6-201ENST00000606899 438 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms