Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CDH12P55289 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDH12P55289 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2□□□□□ -2.09
CDH12P55289 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2□□□□□ -2.09
CDH12P55289 Y_RNA.54-201ENST00000362766 105 ntBASIC2□□□□□ -2.09
CDH12P55289 SNORA33-201ENST00000363664 130 ntBASIC2□□□□□ -2.09
CDH12P55289 RNU6-271P-201ENST00000363858 105 ntBASIC2□□□□□ -2.09
CDH12P55289 Y_RNA.275-201ENST00000364726 110 ntBASIC2□□□□□ -2.09
CDH12P55289 RNU6-740P-201ENST00000364734 105 ntBASIC2□□□□□ -2.09
CDH12P55289 SNORA6-201ENST00000384033 151 ntBASIC2□□□□□ -2.09
CDH12P55289 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
CDH12P55289 MIR597-201ENST00000384968 97 ntBASIC2□□□□□ -2.09
CDH12P55289 MIR1253-201ENST00000408273 105 ntBASIC2□□□□□ -2.09
CDH12P55289 RNU6-651P-201ENST00000411040 105 ntBASIC2□□□□□ -2.09
CDH12P55289 ATP5J2P3-201ENST00000451550 258 ntBASIC2□□□□□ -2.09
CDH12P55289 AL021397.1-201ENST00000451806 248 ntBASIC2□□□□□ -2.09
CDH12P55289 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2□□□□□ -2.09
CDH12P55289 RPS27P22-201ENST00000478056 241 ntBASIC2□□□□□ -2.09
CDH12P55289 SNORA70.12-201ENST00000516084 153 ntBASIC2□□□□□ -2.09
CDH12P55289 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2□□□□□ -2.09
CDH12P55289 MIR3671-201ENST00000580455 88 ntBASIC2□□□□□ -2.09
CDH12P55289 AL512605.2-201ENST00000592972 256 ntBASIC2□□□□□ -2.09
CDH12P55289 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2□□□□□ -2.09
CDH12P55289 AL353149.1-201ENST00000610667 244 ntBASIC2□□□□□ -2.09
CDH12P55289 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
CDH12P55289 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
CDH12P55289 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CDH12P55289 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2□□□□□ -2.09
CDH12P55289 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH12P55289 CENPCP1-201ENST00000533085 2578 ntBASIC1.99□□□□□ -2.09
CDH12P55289 AL356292.1-201ENST00000283110 373 ntBASIC1.99□□□□□ -2.09
CDH12P55289 UBE2WP1-201ENST00000362030 340 ntBASIC1.99□□□□□ -2.09
CDH12P55289 Y_RNA.20-201ENST00000362479 113 ntBASIC1.99□□□□□ -2.09
CDH12P55289 Y_RNA.117-201ENST00000363294 101 ntBASIC1.99□□□□□ -2.09
CDH12P55289 Y_RNA.217-201ENST00000364214 105 ntBASIC1.99□□□□□ -2.09
CDH12P55289 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.99□□□□□ -2.09
CDH12P55289 RNU6-855P-201ENST00000410395 104 ntBASIC1.99□□□□□ -2.09
CDH12P55289 AC099677.2-201ENST00000436385 175 ntBASIC1.99□□□□□ -2.09
CDH12P55289 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH12P55289 Y_RNA.641-201ENST00000459414 105 ntBASIC1.99□□□□□ -2.09
CDH12P55289 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
CDH12P55289 YWHAEP4-201ENST00000505390 198 ntBASIC1.99□□□□□ -2.09
CDH12P55289 RNA5SP200-201ENST00000516360 103 ntBASIC1.99□□□□□ -2.09
CDH12P55289 RNU6-1337P-201ENST00000516525 95 ntBASIC1.99□□□□□ -2.09
CDH12P55289 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
CDH12P55289 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
CDH12P55289 AP005660.1-201ENST00000522972 293 ntBASIC1.99□□□□□ -2.09
CDH12P55289 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
CDH12P55289 MIR4438-201ENST00000585271 93 ntBASIC1.99□□□□□ -2.09
CDH12P55289 U6.73-201ENST00000619194 103 ntBASIC1.99□□□□□ -2.09
CDH12P55289 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDH12P55289 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU6-862P-201ENST00000362804 105 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU1-22P-201ENST00000363334 158 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU6-801P-201ENST00000364087 105 ntBASIC1.98□□□□□ -2.09
CDH12P55289 SNORA20.1-201ENST00000364790 130 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
CDH12P55289 Y_RNA.310-201ENST00000365063 113 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU6-117P-201ENST00000365415 107 ntBASIC1.98□□□□□ -2.09
CDH12P55289 Y_RNA.368-201ENST00000365547 113 ntBASIC1.98□□□□□ -2.09
CDH12P55289 Y_RNA.476-201ENST00000384347 108 ntBASIC1.98□□□□□ -2.09
CDH12P55289 Y_RNA.478-201ENST00000384358 107 ntBASIC1.98□□□□□ -2.09
CDH12P55289 SNORD116-13-201ENST00000384408 92 ntBASIC1.98□□□□□ -2.09
CDH12P55289 Y_RNA.489-201ENST00000384410 101 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNA5SP467-201ENST00000391274 118 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU6-710P-201ENST00000410424 105 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNA5SP338-201ENST00000410495 85 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNA5SP270-201ENST00000411361 118 ntBASIC1.98□□□□□ -2.09
CDH12P55289 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH12P55289 AC024067.1-201ENST00000426199 223 ntBASIC1.98□□□□□ -2.09
CDH12P55289 AC010409.1-201ENST00000487382 476 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU6-1146P-201ENST00000516282 102 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU6-63P-201ENST00000516690 95 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU7-193P-201ENST00000516723 65 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU6-111P-201ENST00000517179 105 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU7-128P-201ENST00000517247 62 ntBASIC1.98□□□□□ -2.09
CDH12P55289 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH12P55289 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH12P55289 AL137100.2-201ENST00000555786 315 ntBASIC1.98□□□□□ -2.09
CDH12P55289 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
CDH12P55289 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.98□□□□□ -2.09
CDH12P55289 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.98□□□□□ -2.09
CDH12P55289 ZNF658B-202ENST00000615961 3375 ntBASIC1.98□□□□□ -2.09
CDH12P55289 RNU1-96P-201ENST00000364163 162 ntBASIC1.97□□□□□ -2.09
CDH12P55289 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
CDH12P55289 RNU6-301P-201ENST00000384277 107 ntBASIC1.97□□□□□ -2.09
CDH12P55289 RNU6-1289P-201ENST00000384431 106 ntBASIC1.97□□□□□ -2.09
CDH12P55289 SNORA48.3-201ENST00000391081 134 ntBASIC1.97□□□□□ -2.09
CDH12P55289 RNU11-3P-201ENST00000391111 133 ntBASIC1.97□□□□□ -2.09
CDH12P55289 SNORD58.1-201ENST00000391313 66 ntBASIC1.97□□□□□ -2.09
CDH12P55289 HMGN2P3-201ENST00000433603 273 ntBASIC1.97□□□□□ -2.09
CDH12P55289 HMGN2P5-201ENST00000436882 273 ntBASIC1.97□□□□□ -2.09
CDH12P55289 HSPE1P13-201ENST00000451143 297 ntBASIC1.97□□□□□ -2.09
CDH12P55289 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.97□□□□□ -2.09
CDH12P55289 AC097462.1-201ENST00000514125 324 ntBASIC1.97□□□□□ -2.09
CDH12P55289 RNU6-388P-201ENST00000517012 105 ntBASIC1.97□□□□□ -2.09
CDH12P55289 RNU6-389P-201ENST00000517048 105 ntBASIC1.97□□□□□ -2.09
CDH12P55289 SNORA31.25-201ENST00000517242 134 ntBASIC1.97□□□□□ -2.09
CDH12P55289 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH12P55289 U6.108-201ENST00000637764 58 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms