Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-1016P-201ENST00000516689 94 ntBASIC0.92□□□□□ -2.26
CDH4P55283 AC023157.2-201ENST00000540596 141 ntBASIC0.92□□□□□ -2.26
CDH4P55283 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.92□□□□□ -2.26
CDH4P55283 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.92□□□□□ -2.26
CDH4P55283 AC090617.3-201ENST00000573670 475 ntBASIC0.92□□□□□ -2.26
CDH4P55283 GHRLOS.1-201ENST00000610995 70 ntBASIC0.92□□□□□ -2.26
CDH4P55283 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
CDH4P55283 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
CDH4P55283 SNORA20B-201ENST00000384220 132 ntBASIC0.91□□□□□ -2.26
CDH4P55283 MIR548F5-201ENST00000408421 86 ntBASIC0.91□□□□□ -2.26
CDH4P55283 RNU6-1050P-201ENST00000410388 107 ntBASIC0.91□□□□□ -2.26
CDH4P55283 RPS3AP52-201ENST00000435639 297 ntBASIC0.91□□□□□ -2.26
CDH4P55283 MTND1P34-201ENST00000438556 671 ntBASIC0.91□□□□□ -2.26
CDH4P55283 U8.22-201ENST00000459141 133 ntBASIC0.91□□□□□ -2.26
CDH4P55283 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.91□□□□□ -2.26
CDH4P55283 RNU6-107P-201ENST00000516643 102 ntBASIC0.91□□□□□ -2.26
CDH4P55283 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.91□□□□□ -2.26
CDH4P55283 MIR4452-201ENST00000583004 71 ntBASIC0.91□□□□□ -2.26
CDH4P55283 SNORA28-201ENST00000606769 126 ntBASIC0.91□□□□□ -2.26
CDH4P55283 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.26
CDH4P55283 RNA5SP361-201ENST00000362686 118 ntBASIC0.9□□□□□ -2.27
CDH4P55283 RNU6-593P-201ENST00000364716 112 ntBASIC0.9□□□□□ -2.27
CDH4P55283 Y_RNA.364-201ENST00000365532 101 ntBASIC0.9□□□□□ -2.27
CDH4P55283 Y_RNA.557-201ENST00000384680 107 ntBASIC0.9□□□□□ -2.27
CDH4P55283 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.9□□□□□ -2.27
CDH4P55283 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.9□□□□□ -2.27
CDH4P55283 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.9□□□□□ -2.27
CDH4P55283 AC097462.1-201ENST00000514125 324 ntBASIC0.9□□□□□ -2.27
CDH4P55283 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.9□□□□□ -2.27
CDH4P55283 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.9□□□□□ -2.27
CDH4P55283 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
CDH4P55283 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.9□□□□□ -2.27
CDH4P55283 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
CDH4P55283 AC027514.1-201ENST00000588561 1603 ntBASIC0.89□□□□□ -2.27
CDH4P55283 Y_RNA.2-201ENST00000362330 96 ntBASIC0.89□□□□□ -2.27
CDH4P55283 RNU6-199P-201ENST00000362954 107 ntBASIC0.89□□□□□ -2.27
CDH4P55283 RNY1P16-201ENST00000363063 111 ntBASIC0.89□□□□□ -2.27
CDH4P55283 RNU6-1264P-201ENST00000383891 107 ntBASIC0.89□□□□□ -2.27
CDH4P55283 Y_RNA.404-201ENST00000383978 102 ntBASIC0.89□□□□□ -2.27
CDH4P55283 AC074085.1-201ENST00000413598 418 ntBASIC0.89□□□□□ -2.27
CDH4P55283 AC063976.4-201ENST00000421971 163 ntBASIC0.89□□□□□ -2.27
CDH4P55283 MTND1P4-201ENST00000435196 415 ntBASIC0.89□□□□□ -2.27
CDH4P55283 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
CDH4P55283 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.89□□□□□ -2.27
CDH4P55283 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
CDH4P55283 RPL7P42-201ENST00000481005 679 ntBASIC0.89□□□□□ -2.27
CDH4P55283 AC018710.1-201ENST00000506509 158 ntBASIC0.89□□□□□ -2.27
CDH4P55283 SCARNA16.2-201ENST00000516520 172 ntBASIC0.89□□□□□ -2.27
CDH4P55283 RNU6-358P-201ENST00000516564 75 ntBASIC0.89□□□□□ -2.27
CDH4P55283 AP002001.1-203ENST00000534002 267 ntBASIC0.89□□□□□ -2.27
CDH4P55283 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.89□□□□□ -2.27
CDH4P55283 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
CDH4P55283 AC060780.3-201ENST00000589464 80 ntBASIC0.89□□□□□ -2.27
CDH4P55283 AC009229.3-201ENST00000608056 282 ntBASIC0.89□□□□□ -2.27
CDH4P55283 AC084782.3-201ENST00000612282 578 ntBASIC0.89□□□□□ -2.27
CDH4P55283 MIR6079-201ENST00000635807 62 ntBASIC0.89□□□□□ -2.27
CDH4P55283 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CDH4P55283 MIR410-201ENST00000362222 80 ntBASIC0.88□□□□□ -2.27
CDH4P55283 Y_RNA.88-201ENST00000363029 99 ntBASIC0.88□□□□□ -2.27
CDH4P55283 Y_RNA.265-201ENST00000364677 108 ntBASIC0.88□□□□□ -2.27
CDH4P55283 RNU6-318P-201ENST00000384283 103 ntBASIC0.88□□□□□ -2.27
CDH4P55283 MIR520E-201ENST00000384867 87 ntBASIC0.88□□□□□ -2.27
CDH4P55283 RNU11-5P-201ENST00000391216 129 ntBASIC0.88□□□□□ -2.27
CDH4P55283 MTCO3P19-201ENST00000415864 321 ntBASIC0.88□□□□□ -2.27
CDH4P55283 AL353997.1-201ENST00000432936 108 ntBASIC0.88□□□□□ -2.27
CDH4P55283 MTND3P10-201ENST00000450967 341 ntBASIC0.88□□□□□ -2.27
CDH4P55283 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.88□□□□□ -2.27
CDH4P55283 Y_RNA.673-201ENST00000516306 88 ntBASIC0.88□□□□□ -2.27
CDH4P55283 RN7SKP49-201ENST00000516675 260 ntBASIC0.88□□□□□ -2.27
CDH4P55283 Y_RNA.708-201ENST00000516950 96 ntBASIC0.88□□□□□ -2.27
CDH4P55283 RNU7-172P-201ENST00000517125 64 ntBASIC0.88□□□□□ -2.27
CDH4P55283 AC091178.2-201ENST00000584401 117 ntBASIC0.88□□□□□ -2.27
CDH4P55283 FAM106DP-201ENST00000586416 501 ntBASIC0.88□□□□□ -2.27
CDH4P55283 AC080078.2-201ENST00000603766 501 ntBASIC0.88□□□□□ -2.27
CDH4P55283 FAM71BP1-201ENST00000604431 523 ntBASIC0.88□□□□□ -2.27
CDH4P55283 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.88□□□□□ -2.27
CDH4P55283 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CDH4P55283 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CDH4P55283 SNORA27.1-201ENST00000362604 124 ntBASIC0.87□□□□□ -2.27
CDH4P55283 RNU6-454P-201ENST00000364292 107 ntBASIC0.87□□□□□ -2.27
CDH4P55283 Y_RNA.482-201ENST00000384377 111 ntBASIC0.87□□□□□ -2.27
CDH4P55283 RNU6-601P-201ENST00000384540 107 ntBASIC0.87□□□□□ -2.27
CDH4P55283 MIR19B1-201ENST00000384829 87 ntBASIC0.87□□□□□ -2.27
CDH4P55283 SNORD41-201ENST00000386967 70 ntBASIC0.87□□□□□ -2.27
CDH4P55283 RNU6-700P-201ENST00000391043 107 ntBASIC0.87□□□□□ -2.27
CDH4P55283 AL451046.2-201ENST00000403074 277 ntBASIC0.87□□□□□ -2.27
CDH4P55283 RNU6-1054P-201ENST00000411293 104 ntBASIC0.87□□□□□ -2.27
CDH4P55283 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.87□□□□□ -2.27
CDH4P55283 MTCYBP10-201ENST00000424905 650 ntBASIC0.87□□□□□ -2.27
CDH4P55283 AC245047.7-201ENST00000440265 293 ntBASIC0.87□□□□□ -2.27
CDH4P55283 UQCRBP2-201ENST00000447827 297 ntBASIC0.87□□□□□ -2.27
CDH4P55283 FGF7P6-202ENST00000451282 293 ntBASIC0.87□□□□□ -2.27
CDH4P55283 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.87□□□□□ -2.27
CDH4P55283 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.87□□□□□ -2.27
CDH4P55283 SNORD124-201ENST00000459577 104 ntBASIC0.87□□□□□ -2.27
CDH4P55283 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.87□□□□□ -2.27
CDH4P55283 AC074133.1-201ENST00000515696 183 ntBASIC0.87□□□□□ -2.27
CDH4P55283 RNU6-322P-201ENST00000516010 103 ntBASIC0.87□□□□□ -2.27
CDH4P55283 RNA5SP168-201ENST00000516642 112 ntBASIC0.87□□□□□ -2.27
CDH4P55283 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms