Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MIR518C-201ENST00000384822 101 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 MIR29B2-201ENST00000385055 81 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 MIR9-1-201ENST00000385198 89 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 AL590004.2-201ENST00000404787 371 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 MIR1283-1-201ENST00000408494 87 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3□□□□□ -1.93
NCKAP1LP55160 AC097463.2-201ENST00000421074 142 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 AC245047.4-201ENST00000433189 144 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 SNORD65B-201ENST00000459126 73 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 RNU6-221P-201ENST00000459541 99 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 RNA5SP76-201ENST00000516277 87 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 RNU6-589P-201ENST00000516485 107 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 Y_RNA.709-201ENST00000516952 92 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 GTF3AP2-201ENST00000557014 266 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 POLR3GP1-201ENST00000594073 261 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3□□□□□ -1.93
NCKAP1LP55160 AC005972.2-201ENST00000604690 348 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 AL670379.2-201ENST00000604983 252 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 Six3os1_7.1-201ENST00000621512 201 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 MIR3914-2-201ENST00000637339 95 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 AC009487.4-201ENST00000624969 3585 ntBASIC3□□□□□ -1.93
NCKAP1LP55160 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3□□□□□ -1.93
NCKAP1LP55160 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.99□□□□□ -1.93
NCKAP1LP55160 SNORA25.7-201ENST00000364375 127 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 RNU6-484P-201ENST00000384016 107 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 AL135786.1-201ENST00000415892 214 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.99□□□□□ -1.93
NCKAP1LP55160 RNU6-437P-201ENST00000459408 95 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 RNU7-57P-201ENST00000459540 60 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 RN7SL499P-201ENST00000481141 276 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 RNU6-197P-201ENST00000516680 100 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.99□□□□□ -1.93
NCKAP1LP55160 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NCKAP1LP55160 RNU6-975P-201ENST00000384296 105 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 Y_RNA.584-201ENST00000391090 114 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 RNA5SP252-201ENST00000391131 119 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.98□□□□□ -1.93
NCKAP1LP55160 AC010531.2-201ENST00000465012 153 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 CYCTP-201ENST00000504253 315 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 RNA5SP356-201ENST00000515972 94 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 RNU5F-4P-201ENST00000516581 114 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.98□□□□□ -1.93
NCKAP1LP55160 MIR6129-201ENST00000616087 109 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 AC006435.5-201ENST00000624486 112 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 snoZ196.1-201ENST00000625269 89 ntBASIC2.98□□□□□ -1.93
NCKAP1LP55160 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NCKAP1LP55160 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NCKAP1LP55160 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
NCKAP1LP55160 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NCKAP1LP55160 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NCKAP1LP55160 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NCKAP1LP55160 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.97□□□□□ -1.93
NCKAP1LP55160 SNORA63.4-201ENST00000362763 126 ntBASIC2.97□□□□□ -1.93
NCKAP1LP55160 RNU6-117P-201ENST00000365415 107 ntBASIC2.97□□□□□ -1.93
NCKAP1LP55160 U8.9-201ENST00000365667 134 ntBASIC2.97□□□□□ -1.93
NCKAP1LP55160 MIR887-201ENST00000401258 79 ntBASIC2.97□□□□□ -1.93
NCKAP1LP55160 AL031121.1-201ENST00000406553 254 ntBASIC2.97□□□□□ -1.93
NCKAP1LP55160 Y_RNA.622-201ENST00000411091 108 ntBASIC2.97□□□□□ -1.93
NCKAP1LP55160 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.97□□□□□ -1.93
NCKAP1LP55160 SNORA59A-201ENST00000459326 152 ntBASIC2.97□□□□□ -1.93
NCKAP1LP55160 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.97□□□□□ -1.93
NCKAP1LP55160 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NCKAP1LP55160 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
NCKAP1LP55160 Y_RNA.120-201ENST00000363304 110 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 SNORA40.5-201ENST00000391061 128 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 AL512604.1-201ENST00000404812 257 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 SNORA79-201ENST00000408376 140 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 SNORD88.1-201ENST00000408684 91 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 EEF1B2P7-201ENST00000451177 676 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.96□□□□□ -1.94
NCKAP1LP55160 AL031183.1-201ENST00000457667 207 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 AP001486.1-201ENST00000463339 476 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 AL049873.1-201ENST00000480540 376 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.96□□□□□ -1.94
NCKAP1LP55160 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.96□□□□□ -1.94
NCKAP1LP55160 AC090142.3-201ENST00000519012 385 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.96□□□□□ -1.94
NCKAP1LP55160 Y_RNA.757-201ENST00000578934 114 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 RPL30P11-203ENST00000598995 310 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 AC097639.2-201ENST00000603159 172 ntBASIC2.96□□□□□ -1.94
NCKAP1LP55160 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NCKAP1LP55160 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NCKAP1LP55160 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NCKAP1LP55160 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NCKAP1LP55160 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 AL356292.1-201ENST00000283110 373 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 Y_RNA.43-201ENST00000362670 111 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.95□□□□□ -1.94
NCKAP1LP55160 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.95□□□□□ -1.94
NCKAP1LP55160 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.95□□□□□ -1.94
NCKAP1LP55160 AL158147.1-201ENST00000443970 75 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 RNU7-14P-201ENST00000459331 62 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 RPL23AP54-201ENST00000495129 419 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 RNA5SP20-201ENST00000515976 84 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 RNA5SP153-201ENST00000516498 76 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.95□□□□□ -1.94
NCKAP1LP55160 MIR3121-201ENST00000579680 77 ntBASIC2.95□□□□□ -1.94
NCKAP1LP55160 MIR4513-201ENST00000581077 86 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms