Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-911P-201ENST00000516523 104 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 SUMO2P18-201ENST00000518873 252 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 CYCSP23-201ENST00000519781 313 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 AC018448.1-201ENST00000552843 316 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 AC006001.4-201ENST00000622243 395 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.49□□□□□ -2.17
HMGCS2P54868 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HMGCS2P54868 MIR410-201ENST00000362222 80 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 SNORA33-201ENST00000363664 130 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 RNU6-961P-201ENST00000363893 105 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 Y_RNA.813-201ENST00000364639 102 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 RPS20P15-201ENST00000412792 311 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 PMCHL1-202ENST00000423102 261 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 UQCRBP2-201ENST00000447827 297 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 AC074290.1-201ENST00000448883 135 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 HMGN1P13-201ENST00000505795 138 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 RNU6-1170P-201ENST00000515974 106 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 RNU6-1012P-201ENST00000516606 109 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.48□□□□□ -2.17
HMGCS2P54868 AC055872.1-201ENST00000570978 278 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 MIR5094-201ENST00000578766 85 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 MIR5188-201ENST00000583467 113 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 AC007485.1-201ENST00000616755 206 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.48□□□□□ -2.17
HMGCS2P54868 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGCS2P54868 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HMGCS2P54868 snoU2-30.2-201ENST00000362805 70 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 Y_RNA.138-201ENST00000363462 102 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 SNORD114-27-201ENST00000363766 70 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 RNU6-1264P-201ENST00000383891 107 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 Y_RNA.460-201ENST00000384255 102 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 RNU6-308P-201ENST00000390957 107 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AC245047.4-201ENST00000433189 144 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AC010409.1-201ENST00000487382 476 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGCS2P54868 RNU6-107P-201ENST00000516643 102 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AC006600.1-201ENST00000572529 153 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.47□□□□□ -2.17
HMGCS2P54868 VN1R91P-201ENST00000594377 169 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AL078603.1-201ENST00000603824 313 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AC073413.2-201ENST00000604332 360 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AC010900.2-201ENST00000604508 210 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AC090574.1-201ENST00000623186 233 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 AL606534.2-204ENST00000635008 178 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 U6.108-201ENST00000637764 58 ntBASIC1.47□□□□□ -2.17
HMGCS2P54868 MIR126-201ENST00000362291 85 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 Y_RNA.27-201ENST00000362540 103 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 RNU1-96P-201ENST00000364163 162 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 RNU6-454P-201ENST00000364292 107 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 RNU6-1240P-201ENST00000365155 104 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 RNU6-926P-201ENST00000384075 107 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 RNU6-296P-201ENST00000384608 107 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 RNU6-417P-201ENST00000384712 107 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HMGCS2P54868 RAB28P5-201ENST00000427490 651 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 TOMM22P2-201ENST00000430735 237 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 MTND4P19-201ENST00000446659 478 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 SNORD65B-201ENST00000459126 73 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 AC011476.5-201ENST00000615594 130 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 RMST_2.1-201ENST00000617263 136 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 AC090971.5-201ENST00000621102 293 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 U6.92-201ENST00000636464 89 ntBASIC1.46□□□□□ -2.18
HMGCS2P54868 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.45□□□□□ -2.18
HMGCS2P54868 RNU6-112P-201ENST00000363599 104 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 RNU1-93P-201ENST00000364704 169 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 Y_RNA.498-201ENST00000384460 102 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 AL355796.1-201ENST00000406706 323 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.45□□□□□ -2.18
HMGCS2P54868 AC008134.1-201ENST00000420943 193 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 CST2P1-201ENST00000425770 87 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 RNU6-625P-201ENST00000459412 107 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 RNU6-408P-201ENST00000515910 100 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 RNU6-970P-201ENST00000516312 107 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.45□□□□□ -2.18
HMGCS2P54868 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGCS2P54868 AC006157.1-201ENST00000611750 366 ntBASIC1.45□□□□□ -2.18
HMGCS2P54868 RNA5SP467-201ENST00000391274 118 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 MCFD2P1-201ENST00000417812 300 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGCS2P54868 AC093852.1-201ENST00000503587 266 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 SNORA40.14-201ENST00000516543 86 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 RNU7-128P-201ENST00000517247 62 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 AC011604.1-201ENST00000545978 196 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 MIR4659A-201ENST00000580269 81 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGCS2P54868 AC240442.1-201ENST00000616055 283 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGCS2P54868 MIR3674-201ENST00000636576 68 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 AC091812.1-201ENST00000432235 1948 ntBASIC1.44□□□□□ -2.18
HMGCS2P54868 AC245060.5-201ENST00000610778 3293 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 Y_RNA.39-201ENST00000362620 98 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 Y_RNA.148-201ENST00000363557 117 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 RNU6-42P-201ENST00000384165 107 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 Y_RNA.445-201ENST00000384168 102 ntBASIC1.43□□□□□ -2.18
HMGCS2P54868 MIR628-201ENST00000385229 95 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms