Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU6-438P-201ENST00000365561 103 ntBASIC2.18□□□□□ -2.06
PMS2P54278 RNU6-975P-201ENST00000384296 105 ntBASIC2.18□□□□□ -2.06
PMS2P54278 Y_RNA.569-201ENST00000384749 103 ntBASIC2.18□□□□□ -2.06
PMS2P54278 SNORA53-201ENST00000391141 249 ntBASIC2.18□□□□□ -2.06
PMS2P54278 AL591806.2-201ENST00000433122 173 ntBASIC2.18□□□□□ -2.06
PMS2P54278 HMGN2P3-201ENST00000433603 273 ntBASIC2.18□□□□□ -2.06
PMS2P54278 HMGN2P5-201ENST00000436882 273 ntBASIC2.18□□□□□ -2.06
PMS2P54278 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.18□□□□□ -2.06
PMS2P54278 MTND4LP30-201ENST00000454092 297 ntBASIC2.18□□□□□ -2.06
PMS2P54278 AC055731.1-201ENST00000474387 401 ntBASIC2.18□□□□□ -2.06
PMS2P54278 RNU2-19P-201ENST00000517288 84 ntBASIC2.18□□□□□ -2.06
PMS2P54278 AC015712.3-201ENST00000559380 164 ntBASIC2.18□□□□□ -2.06
PMS2P54278 MIR3684-201ENST00000579779 74 ntBASIC2.18□□□□□ -2.06
PMS2P54278 uc_338.20-201ENST00000621563 178 ntBASIC2.18□□□□□ -2.06
PMS2P54278 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
PMS2P54278 AC006001.4-201ENST00000622243 395 ntBASIC2.18□□□□□ -2.06
PMS2P54278 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PMS2P54278 SNORA16B-201ENST00000364674 135 ntBASIC2.17□□□□□ -2.06
PMS2P54278 Y_RNA.332-201ENST00000365271 113 ntBASIC2.17□□□□□ -2.06
PMS2P54278 Y_RNA.383-201ENST00000383855 97 ntBASIC2.17□□□□□ -2.06
PMS2P54278 RNU6-1026P-201ENST00000384465 108 ntBASIC2.17□□□□□ -2.06
PMS2P54278 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PMS2P54278 MIR764-201ENST00000390811 85 ntBASIC2.17□□□□□ -2.06
PMS2P54278 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.17□□□□□ -2.06
PMS2P54278 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.17□□□□□ -2.06
PMS2P54278 AC114982.1-201ENST00000469402 321 ntBASIC2.17□□□□□ -2.06
PMS2P54278 AC007229.1-201ENST00000590455 412 ntBASIC2.17□□□□□ -2.06
PMS2P54278 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.17□□□□□ -2.06
PMS2P54278 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PMS2P54278 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.16□□□□□ -2.06
PMS2P54278 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.16□□□□□ -2.06
PMS2P54278 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PMS2P54278 SNORD114-7-201ENST00000362520 77 ntBASIC2.16□□□□□ -2.06
PMS2P54278 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
PMS2P54278 Y_RNA.418-201ENST00000384029 102 ntBASIC2.16□□□□□ -2.06
PMS2P54278 MIR518A2-201ENST00000384966 87 ntBASIC2.16□□□□□ -2.06
PMS2P54278 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
PMS2P54278 RNU6-482P-201ENST00000391068 107 ntBASIC2.16□□□□□ -2.06
PMS2P54278 AC074290.1-201ENST00000448883 135 ntBASIC2.16□□□□□ -2.06
PMS2P54278 SUMO1P2-201ENST00000452524 304 ntBASIC2.16□□□□□ -2.06
PMS2P54278 RNU7-57P-201ENST00000459540 60 ntBASIC2.16□□□□□ -2.06
PMS2P54278 RNU6-221P-201ENST00000459541 99 ntBASIC2.16□□□□□ -2.06
PMS2P54278 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.16□□□□□ -2.06
PMS2P54278 RNU6-436P-201ENST00000516171 114 ntBASIC2.16□□□□□ -2.06
PMS2P54278 RNU2-34P-201ENST00000516534 121 ntBASIC2.16□□□□□ -2.06
PMS2P54278 RNU6-107P-201ENST00000516643 102 ntBASIC2.16□□□□□ -2.06
PMS2P54278 AC087441.2-201ENST00000529141 262 ntBASIC2.16□□□□□ -2.06
PMS2P54278 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.16□□□□□ -2.06
PMS2P54278 MIR4753-201ENST00000585119 83 ntBASIC2.16□□□□□ -2.06
PMS2P54278 AC006380.1-201ENST00000603598 186 ntBASIC2.16□□□□□ -2.06
PMS2P54278 AC025754.2-201ENST00000606491 432 ntBASIC2.16□□□□□ -2.06
PMS2P54278 AC141273.2-201ENST00000618989 130 ntBASIC2.16□□□□□ -2.06
PMS2P54278 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.16□□□□□ -2.06
PMS2P54278 UBE2WP1-201ENST00000362030 340 ntBASIC2.15□□□□□ -2.07
PMS2P54278 SNORD115-30-201ENST00000364117 82 ntBASIC2.15□□□□□ -2.07
PMS2P54278 SNORA20.1-201ENST00000364790 130 ntBASIC2.15□□□□□ -2.07
PMS2P54278 RNU6-1318P-201ENST00000365389 103 ntBASIC2.15□□□□□ -2.07
PMS2P54278 AL603910.2-201ENST00000407268 136 ntBASIC2.15□□□□□ -2.07
PMS2P54278 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.15□□□□□ -2.07
PMS2P54278 AC123900.1-201ENST00000420390 96 ntBASIC2.15□□□□□ -2.07
PMS2P54278 POLR2KP2-201ENST00000438155 177 ntBASIC2.15□□□□□ -2.07
PMS2P54278 MTCO1P44-201ENST00000441935 243 ntBASIC2.15□□□□□ -2.07
PMS2P54278 RPL23AP3-201ENST00000453844 468 ntBASIC2.15□□□□□ -2.07
PMS2P54278 RNU6-948P-201ENST00000516374 107 ntBASIC2.15□□□□□ -2.07
PMS2P54278 SCARNA16.3-201ENST00000516595 184 ntBASIC2.15□□□□□ -2.07
PMS2P54278 AC005357.1-201ENST00000588399 301 ntBASIC2.15□□□□□ -2.07
PMS2P54278 BX284668.6-201ENST00000606899 438 ntBASIC2.15□□□□□ -2.07
PMS2P54278 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.15□□□□□ -2.07
PMS2P54278 U2.14-201ENST00000615943 113 ntBASIC2.15□□□□□ -2.07
PMS2P54278 snoZ196.1-201ENST00000625269 89 ntBASIC2.15□□□□□ -2.07
PMS2P54278 U6.115-201ENST00000636045 103 ntBASIC2.15□□□□□ -2.07
PMS2P54278 Y_RNA.60-201ENST00000362831 98 ntBASIC2.14□□□□□ -2.07
PMS2P54278 RNY1-201ENST00000364228 113 ntBASIC2.14□□□□□ -2.07
PMS2P54278 Y_RNA.257-201ENST00000364596 102 ntBASIC2.14□□□□□ -2.07
PMS2P54278 RNU6-1235P-201ENST00000384559 107 ntBASIC2.14□□□□□ -2.07
PMS2P54278 RNU6-160P-201ENST00000384591 107 ntBASIC2.14□□□□□ -2.07
PMS2P54278 Y_RNA.539-201ENST00000384635 107 ntBASIC2.14□□□□□ -2.07
PMS2P54278 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PMS2P54278 RNA5SP465-201ENST00000391195 109 ntBASIC2.14□□□□□ -2.07
PMS2P54278 MTCO1P5-201ENST00000433573 344 ntBASIC2.14□□□□□ -2.07
PMS2P54278 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
PMS2P54278 RNU6-498P-201ENST00000459468 107 ntBASIC2.14□□□□□ -2.07
PMS2P54278 Y_RNA.673-201ENST00000516306 88 ntBASIC2.14□□□□□ -2.07
PMS2P54278 RNU6-155P-201ENST00000516347 100 ntBASIC2.14□□□□□ -2.07
PMS2P54278 SNORA27.4-201ENST00000516650 95 ntBASIC2.14□□□□□ -2.07
PMS2P54278 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
PMS2P54278 SCARNA24.2-201ENST00000516968 130 ntBASIC2.14□□□□□ -2.07
PMS2P54278 MIR3935-201ENST00000583472 104 ntBASIC2.14□□□□□ -2.07
PMS2P54278 AC010900.2-201ENST00000604508 210 ntBASIC2.14□□□□□ -2.07
PMS2P54278 AC037487.3-201ENST00000606668 112 ntBASIC2.14□□□□□ -2.07
PMS2P54278 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.14□□□□□ -2.07
PMS2P54278 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.14□□□□□ -2.07
PMS2P54278 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.13□□□□□ -2.07
PMS2P54278 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PMS2P54278 RNU6-1266P-201ENST00000362794 105 ntBASIC2.13□□□□□ -2.07
PMS2P54278 Y_RNA.552-201ENST00000384665 112 ntBASIC2.13□□□□□ -2.07
PMS2P54278 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
PMS2P54278 RNU6-388P-201ENST00000517012 105 ntBASIC2.13□□□□□ -2.07
PMS2P54278 RNU6-389P-201ENST00000517048 105 ntBASIC2.13□□□□□ -2.07
PMS2P54278 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms