Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SCARNA23-201ENST00000516060 130 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RNU6-991P-201ENST00000516168 107 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RNU7-128P-201ENST00000517247 62 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 AC022523.2-201ENST00000561045 150 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF144AP50876 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF144AP50876 UCA1.1-201ENST00000620952 75 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF144AP50876 AC091564.4-201ENST00000533934 2194 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNF144AP50876 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF144AP50876 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RNF144AP50876 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.49□□□□□ -1.85
RNF144AP50876 SNORD115-28-201ENST00000363931 81 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 Y_RNA.332-201ENST00000365271 113 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 MIR218-1-201ENST00000384999 110 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 RNA5SP467-201ENST00000391274 118 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 MIR1912-201ENST00000410389 80 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 AL049830.1-201ENST00000468034 425 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 RN7SKP83-201ENST00000516512 178 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 RNU7-25P-201ENST00000516544 62 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 AC091544.4-201ENST00000555268 342 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 MIR4305-201ENST00000583252 102 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.49□□□□□ -1.85
RNF144AP50876 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF144AP50876 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
RNF144AP50876 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RNF144AP50876 AL161912.2-201ENST00000565707 3007 ntBASIC3.49□□□□□ -1.85
RNF144AP50876 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF144AP50876 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF144AP50876 ICE2P2-201ENST00000483823 2787 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 Y_RNA.17-201ENST00000362433 111 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 Y_RNA.37-201ENST00000362606 108 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 RNU6-442P-201ENST00000383968 104 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 AC009238.1-201ENST00000442165 424 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 AC009237.6-201ENST00000446969 424 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 AC106707.2-201ENST00000484182 374 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 RNU7-6P-201ENST00000516845 62 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 AC087499.8-201ENST00000578406 226 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 AC025521.1-201ENST00000621624 286 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.48□□□□□ -1.85
RNF144AP50876 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
RNF144AP50876 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF144AP50876 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF144AP50876 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF144AP50876 SNORD14E-201ENST00000364009 85 ntBASIC3.47□□□□□ -1.85
RNF144AP50876 MIR199A2-201ENST00000385289 110 ntBASIC3.47□□□□□ -1.85
RNF144AP50876 Y_RNA.593-201ENST00000410292 98 ntBASIC3.47□□□□□ -1.85
RNF144AP50876 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF144AP50876 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RNF144AP50876 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF144AP50876 SNORD36C-201ENST00000516733 66 ntBASIC3.47□□□□□ -1.85
RNF144AP50876 SNORA62.6-201ENST00000606322 83 ntBASIC3.47□□□□□ -1.85
RNF144AP50876 AC006441.5-201ENST00000612680 209 ntBASIC3.47□□□□□ -1.85
RNF144AP50876 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.47□□□□□ -1.85
RNF144AP50876 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RNF144AP50876 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF144AP50876 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
RNF144AP50876 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.46□□□□□ -1.85
RNF144AP50876 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.46□□□□□ -1.85
RNF144AP50876 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF144AP50876 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
RNF144AP50876 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RNF144AP50876 RNU6-1084P-201ENST00000362498 107 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 Y_RNA.351-201ENST00000365436 96 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 RNU6-1124P-201ENST00000384169 107 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 AC099677.2-201ENST00000436385 175 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 CKS1BP2-201ENST00000497342 240 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 RNU1-142P-201ENST00000516682 145 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 SCARNA11.3-201ENST00000517276 130 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 MIR4778-201ENST00000577635 80 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 MIR4286-201ENST00000580651 93 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 AL137849.1-201ENST00000604767 169 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 MIR5739-201ENST00000619803 80 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RNF144AP50876 AC008264.2-201ENST00000610193 3731 ntBASIC3.46□□□□□ -1.86
RNF144AP50876 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RNF144AP50876 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF144AP50876 MIR340-201ENST00000362125 95 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 SNORA1B-201ENST00000362535 133 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 SNORD68-201ENST00000363214 84 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 Y_RNA.466-201ENST00000384294 113 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 Y_RNA.547-201ENST00000384654 119 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.45□□□□□ -1.86
RNF144AP50876 AL445646.1-201ENST00000431784 216 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 RPL23AP67-201ENST00000465341 474 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.45□□□□□ -1.86
RNF144AP50876 RNU6-1041P-201ENST00000516254 102 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 SNORA18.7-201ENST00000516910 131 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RNF144AP50876 FAM35CP-201ENST00000554755 2470 ntBASIC3.45□□□□□ -1.86
RNF144AP50876 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.44□□□□□ -1.86
RNF144AP50876 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF144AP50876 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF144AP50876 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.44□□□□□ -1.86
RNF144AP50876 AL021368.2-201ENST00000606125 5352 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms