Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU6-407P-201ENST00000365280 104 ntBASIC0.93□□□□□ -2.26
CASP4P49662 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CASP4P49662 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.93□□□□□ -2.26
CASP4P49662 SNORD12-201ENST00000391002 90 ntBASIC0.93□□□□□ -2.26
CASP4P49662 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.93□□□□□ -2.26
CASP4P49662 MIR548K-201ENST00000408406 116 ntBASIC0.93□□□□□ -2.26
CASP4P49662 Y_RNA.594-201ENST00000410373 140 ntBASIC0.93□□□□□ -2.26
CASP4P49662 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
CASP4P49662 AC018865.2-201ENST00000423631 129 ntBASIC0.93□□□□□ -2.26
CASP4P49662 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
CASP4P49662 AC091021.1-201ENST00000468051 388 ntBASIC0.93□□□□□ -2.26
CASP4P49662 AC092989.1-201ENST00000481235 277 ntBASIC0.93□□□□□ -2.26
CASP4P49662 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.93□□□□□ -2.26
CASP4P49662 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.93□□□□□ -2.26
CASP4P49662 RNA5SP20-201ENST00000515976 84 ntBASIC0.93□□□□□ -2.26
CASP4P49662 RNA5SP168-201ENST00000516642 112 ntBASIC0.93□□□□□ -2.26
CASP4P49662 RNU6-113P-201ENST00000516653 101 ntBASIC0.93□□□□□ -2.26
CASP4P49662 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.93□□□□□ -2.26
CASP4P49662 AP002004.2-201ENST00000531656 154 ntBASIC0.93□□□□□ -2.26
CASP4P49662 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.93□□□□□ -2.26
CASP4P49662 MIR4778-201ENST00000577635 80 ntBASIC0.93□□□□□ -2.26
CASP4P49662 AC093783.1-201ENST00000612976 329 ntBASIC0.93□□□□□ -2.26
CASP4P49662 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CASP4P49662 Y_RNA.2-201ENST00000362330 96 ntBASIC0.92□□□□□ -2.26
CASP4P49662 RNY1P16-201ENST00000363063 111 ntBASIC0.92□□□□□ -2.26
CASP4P49662 RNU6-1050P-201ENST00000410388 107 ntBASIC0.92□□□□□ -2.26
CASP4P49662 CALM2P4-201ENST00000430810 426 ntBASIC0.92□□□□□ -2.26
CASP4P49662 MTND1P34-201ENST00000438556 671 ntBASIC0.92□□□□□ -2.26
CASP4P49662 SUMO1P2-201ENST00000452524 304 ntBASIC0.92□□□□□ -2.26
CASP4P49662 RPL39P39-201ENST00000455840 151 ntBASIC0.92□□□□□ -2.26
CASP4P49662 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
CASP4P49662 OR9P1P-201ENST00000496431 281 ntBASIC0.92□□□□□ -2.26
CASP4P49662 RNU6-1278P-201ENST00000516130 107 ntBASIC0.92□□□□□ -2.26
CASP4P49662 RN7SKP49-201ENST00000516675 260 ntBASIC0.92□□□□□ -2.26
CASP4P49662 Y_RNA.708-201ENST00000516950 96 ntBASIC0.92□□□□□ -2.26
CASP4P49662 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.92□□□□□ -2.26
CASP4P49662 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.92□□□□□ -2.26
CASP4P49662 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.92□□□□□ -2.26
CASP4P49662 AC136932.1-201ENST00000574771 208 ntBASIC0.92□□□□□ -2.26
CASP4P49662 AC091178.2-201ENST00000584401 117 ntBASIC0.92□□□□□ -2.26
CASP4P49662 Y_RNA.6-201ENST00000362350 114 ntBASIC0.91□□□□□ -2.26
CASP4P49662 Y_RNA.86-201ENST00000363020 111 ntBASIC0.91□□□□□ -2.26
CASP4P49662 RNU6-879P-201ENST00000364328 108 ntBASIC0.91□□□□□ -2.26
CASP4P49662 RNU4-40P-201ENST00000364351 143 ntBASIC0.91□□□□□ -2.26
CASP4P49662 SNORD114-22-201ENST00000365423 72 ntBASIC0.91□□□□□ -2.26
CASP4P49662 SNORA2.2-201ENST00000365473 135 ntBASIC0.91□□□□□ -2.26
CASP4P49662 Y_RNA.557-201ENST00000384680 107 ntBASIC0.91□□□□□ -2.26
CASP4P49662 RNU6-376P-201ENST00000384731 106 ntBASIC0.91□□□□□ -2.26
CASP4P49662 MIR19B1-201ENST00000384829 87 ntBASIC0.91□□□□□ -2.26
CASP4P49662 SNORD41-201ENST00000386967 70 ntBASIC0.91□□□□□ -2.26
CASP4P49662 RNU6-910P-201ENST00000390844 107 ntBASIC0.91□□□□□ -2.26
CASP4P49662 RNA5SP482-201ENST00000391269 118 ntBASIC0.91□□□□□ -2.26
CASP4P49662 U8.16-201ENST00000391279 133 ntBASIC0.91□□□□□ -2.26
CASP4P49662 MIR548F5-201ENST00000408421 86 ntBASIC0.91□□□□□ -2.26
CASP4P49662 MIR548F1-201ENST00000408667 84 ntBASIC0.91□□□□□ -2.26
CASP4P49662 MTND3P8-201ENST00000412909 339 ntBASIC0.91□□□□□ -2.26
CASP4P49662 RPS3AP52-201ENST00000435639 297 ntBASIC0.91□□□□□ -2.26
CASP4P49662 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.91□□□□□ -2.26
CASP4P49662 PCNPP5-201ENST00000452246 481 ntBASIC0.91□□□□□ -2.26
CASP4P49662 RNU7-87P-201ENST00000459343 62 ntBASIC0.91□□□□□ -2.26
CASP4P49662 Y_RNA.670-201ENST00000516255 105 ntBASIC0.91□□□□□ -2.26
CASP4P49662 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.91□□□□□ -2.26
CASP4P49662 AC018448.1-201ENST00000552843 316 ntBASIC0.91□□□□□ -2.26
CASP4P49662 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
CASP4P49662 AL357075.2-201ENST00000614906 189 ntBASIC0.91□□□□□ -2.26
CASP4P49662 RNU6-874P-201ENST00000362390 105 ntBASIC0.9□□□□□ -2.27
CASP4P49662 RNA5SP361-201ENST00000362686 118 ntBASIC0.9□□□□□ -2.27
CASP4P49662 Y_RNA.267-201ENST00000364679 109 ntBASIC0.9□□□□□ -2.27
CASP4P49662 Y_RNA.473-201ENST00000384333 102 ntBASIC0.9□□□□□ -2.27
CASP4P49662 Y_RNA.498-201ENST00000384460 102 ntBASIC0.9□□□□□ -2.27
CASP4P49662 RNU6-601P-201ENST00000384540 107 ntBASIC0.9□□□□□ -2.27
CASP4P49662 MIR873-201ENST00000401120 77 ntBASIC0.9□□□□□ -2.27
CASP4P49662 AC063976.4-201ENST00000421971 163 ntBASIC0.9□□□□□ -2.27
CASP4P49662 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.9□□□□□ -2.27
CASP4P49662 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.9□□□□□ -2.27
CASP4P49662 AL353997.1-201ENST00000432936 108 ntBASIC0.9□□□□□ -2.27
CASP4P49662 AC245047.7-201ENST00000440265 293 ntBASIC0.9□□□□□ -2.27
CASP4P49662 AL137792.2-201ENST00000443484 235 ntBASIC0.9□□□□□ -2.27
CASP4P49662 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.9□□□□□ -2.27
CASP4P49662 AC107399.1-201ENST00000451226 265 ntBASIC0.9□□□□□ -2.27
CASP4P49662 RNU6-718P-201ENST00000516166 105 ntBASIC0.9□□□□□ -2.27
CASP4P49662 AF235103.2-201ENST00000525753 346 ntBASIC0.9□□□□□ -2.27
CASP4P49662 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.9□□□□□ -2.27
CASP4P49662 AC136443.5-201ENST00000603741 370 ntBASIC0.9□□□□□ -2.27
CASP4P49662 AC002553.4-201ENST00000616896 331 ntBASIC0.9□□□□□ -2.27
CASP4P49662 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CASP4P49662 SNORA1B-201ENST00000362535 133 ntBASIC0.89□□□□□ -2.27
CASP4P49662 MIR520E-201ENST00000384867 87 ntBASIC0.89□□□□□ -2.27
CASP4P49662 MIR520G-201ENST00000385064 90 ntBASIC0.89□□□□□ -2.27
CASP4P49662 RNU6-625P-201ENST00000459412 107 ntBASIC0.89□□□□□ -2.27
CASP4P49662 AC048334.1-201ENST00000477975 159 ntBASIC0.89□□□□□ -2.27
CASP4P49662 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.89□□□□□ -2.27
CASP4P49662 AC022493.2-201ENST00000506122 481 ntBASIC0.89□□□□□ -2.27
CASP4P49662 RNU6-917P-201ENST00000516294 104 ntBASIC0.89□□□□□ -2.27
CASP4P49662 RNU6-307P-201ENST00000516743 106 ntBASIC0.89□□□□□ -2.27
CASP4P49662 AC011604.1-201ENST00000545978 196 ntBASIC0.89□□□□□ -2.27
CASP4P49662 AC005899.2-201ENST00000584353 90 ntBASIC0.89□□□□□ -2.27
CASP4P49662 AC005828.6-201ENST00000606610 232 ntBASIC0.89□□□□□ -2.27
CASP4P49662 AC009229.3-201ENST00000608056 282 ntBASIC0.89□□□□□ -2.27
CASP4P49662 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms