Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MT-TL1-201ENST00000386347 75 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 RNU6-700P-201ENST00000391043 107 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 Y_RNA.595-201ENST00000410403 105 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 MTCYBP10-201ENST00000424905 650 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 AC092423.1-201ENST00000430165 186 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 AC091021.1-201ENST00000468051 388 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.89□□□□□ -2.27
CX3CR1P49238 AC116353.2-201ENST00000505332 712 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 Y_RNA.691-201ENST00000516611 103 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 AC022868.1-201ENST00000517767 391 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.89□□□□□ -2.27
CX3CR1P49238 APOOP3-201ENST00000536787 586 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.89□□□□□ -2.27
CX3CR1P49238 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.89□□□□□ -2.27
CX3CR1P49238 MIR4778-201ENST00000577635 80 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CX3CR1P49238 AC016727.1-205ENST00000605437 569 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 AC087588.2-201ENST00000617667 426 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 AC092794.2-201ENST00000620933 563 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 SNORD3E-202ENST00000627253 216 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 MIR6079-201ENST00000635807 62 ntBASIC0.89□□□□□ -2.27
CX3CR1P49238 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.89□□□□□ -2.27
CX3CR1P49238 AC073544.1-201ENST00000600110 1595 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 SNORA27.1-201ENST00000362604 124 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RNU6-1301P-201ENST00000362724 104 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RNU6-1266P-201ENST00000362794 105 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RNU6-117P-201ENST00000365415 107 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RNU6-1264P-201ENST00000383891 107 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 U8.16-201ENST00000391279 133 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 AL034345.1-201ENST00000407768 123 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 Y_RNA.646-201ENST00000410980 101 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
CX3CR1P49238 AC018865.2-201ENST00000423631 129 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RAB28P5-201ENST00000427490 651 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 MTND1P2-201ENST00000430604 821 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 CALM2P4-201ENST00000430810 426 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 STAG3L5P-204ENST00000443759 179 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RPL30P15-201ENST00000457129 321 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 OR9P1P-201ENST00000496431 281 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 SNORA40.9-201ENST00000515895 93 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RN7SKP49-201ENST00000516675 260 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RNU6-922P-201ENST00000516753 99 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 RNU7-172P-201ENST00000517125 64 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
CX3CR1P49238 MIR4298-201ENST00000584380 73 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 AL513534.2-201ENST00000603836 250 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 AC005828.6-201ENST00000606610 232 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 AC104260.1-201ENST00000616660 539 ntBASIC0.88□□□□□ -2.27
CX3CR1P49238 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CX3CR1P49238 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 AC005592.1-201ENST00000566527 1640 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 MIR410-201ENST00000362222 80 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 RNU6-961P-201ENST00000363893 105 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 RNY3P11-201ENST00000364153 102 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 RNU6-407P-201ENST00000365280 104 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 Y_RNA.390-201ENST00000383932 102 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 Y_RNA.474-201ENST00000384341 102 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 RNU6-310P-201ENST00000384655 107 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.87□□□□□ -2.27
CX3CR1P49238 PCNPP5-201ENST00000452246 481 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 AL163540.1-201ENST00000485382 386 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.87□□□□□ -2.27
CX3CR1P49238 RNA5SP20-201ENST00000515976 84 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 SNORA31.2-201ENST00000516019 134 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 RNU6-966P-201ENST00000516479 104 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 RNU6-63P-201ENST00000516690 95 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 AC092794.1-201ENST00000612734 582 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 AC012676.2-201ENST00000619258 186 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 AL513423.1-201ENST00000621695 132 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 AC006435.5-201ENST00000624486 112 ntBASIC0.87□□□□□ -2.27
CX3CR1P49238 MIRLET7C-201ENST00000362160 84 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 SNORA1B-201ENST00000362535 133 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 Y_RNA.166-201ENST00000363730 102 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNU5F-3P-201ENST00000363767 117 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNU4-38P-201ENST00000364472 129 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CX3CR1P49238 MIR660-201ENST00000385235 97 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 SNORD41-201ENST00000386967 70 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNU6-910P-201ENST00000390844 107 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 FGF7P8-201ENST00000402994 292 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RPL23AP36-201ENST00000413895 458 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 MTCO3P19-201ENST00000415864 321 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 MRPS18CP6-201ENST00000423587 223 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 AL137792.2-201ENST00000443484 235 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 AC093850.1-201ENST00000454121 251 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 MTCO3P10-201ENST00000455912 772 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNU6-625P-201ENST00000459412 107 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 AC048334.1-201ENST00000477975 159 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RPL17P19-201ENST00000489069 552 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNA5SP458-201ENST00000516188 119 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNA5SP168-201ENST00000516642 112 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.86□□□□□ -2.27
CX3CR1P49238 AC073349.3-201ENST00000617616 186 ntBASIC0.86□□□□□ -2.27
CX3CR1P49238 RNU6-1188P-201ENST00000363795 107 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 RNU4-76P-201ENST00000364509 141 ntBASIC0.85□□□□□ -2.27
CX3CR1P49238 Y_RNA.327-201ENST00000365201 102 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms