Protein–RNA interactions for Protein: P40424

PBX1, Pre-B-cell leukemia transcription factor 1, humanhuman

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1P40424 RNU1-40P-201ENST00000516816 164 ntBASIC2.26□□□□□ -2.05
PBX1P40424 RNU1-97P-201ENST00000516872 164 ntBASIC2.26□□□□□ -2.05
PBX1P40424 MIR4648-201ENST00000580107 72 ntBASIC2.26□□□□□ -2.05
PBX1P40424 AL353149.1-201ENST00000610667 244 ntBASIC2.26□□□□□ -2.05
PBX1P40424 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
PBX1P40424 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.26□□□□□ -2.05
PBX1P40424 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
PBX1P40424 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PBX1P40424 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PBX1P40424 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.25□□□□□ -2.05
PBX1P40424 SNORA27.1-201ENST00000362604 124 ntBASIC2.25□□□□□ -2.05
PBX1P40424 RNA5SP493-201ENST00000364115 91 ntBASIC2.25□□□□□ -2.05
PBX1P40424 Y_RNA.350-201ENST00000365409 98 ntBASIC2.25□□□□□ -2.05
PBX1P40424 RNU1-52P-201ENST00000384190 164 ntBASIC2.25□□□□□ -2.05
PBX1P40424 MRPS10P1-201ENST00000448483 130 ntBASIC2.25□□□□□ -2.05
PBX1P40424 RPL39P38-201ENST00000467018 153 ntBASIC2.25□□□□□ -2.05
PBX1P40424 AC011406.1-201ENST00000512440 370 ntBASIC2.25□□□□□ -2.05
PBX1P40424 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.25□□□□□ -2.05
PBX1P40424 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.25□□□□□ -2.05
PBX1P40424 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PBX1P40424 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
PBX1P40424 SNORA25.1-201ENST00000362326 128 ntBASIC2.24□□□□□ -2.05
PBX1P40424 RNU1-58P-201ENST00000362413 163 ntBASIC2.24□□□□□ -2.05
PBX1P40424 Y_RNA.352-201ENST00000365439 102 ntBASIC2.24□□□□□ -2.05
PBX1P40424 MIR1253-201ENST00000408273 105 ntBASIC2.24□□□□□ -2.05
PBX1P40424 MIR548H3-201ENST00000408771 118 ntBASIC2.24□□□□□ -2.05
PBX1P40424 RNU2-61P-201ENST00000411069 191 ntBASIC2.24□□□□□ -2.05
PBX1P40424 AL356320.1-201ENST00000429616 163 ntBASIC2.24□□□□□ -2.05
PBX1P40424 MTCO1P5-201ENST00000433573 344 ntBASIC2.24□□□□□ -2.05
PBX1P40424 SCARNA24.2-201ENST00000516968 130 ntBASIC2.24□□□□□ -2.05
PBX1P40424 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.24□□□□□ -2.05
PBX1P40424 MIR3169-201ENST00000578032 83 ntBASIC2.24□□□□□ -2.05
PBX1P40424 AC012433.1-201ENST00000588916 398 ntBASIC2.24□□□□□ -2.05
PBX1P40424 DEFB117-201ENST00000602356 141 ntBASIC2.24□□□□□ -2.05
PBX1P40424 AC006006.1-201ENST00000603082 144 ntBASIC2.24□□□□□ -2.05
PBX1P40424 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.24□□□□□ -2.05
PBX1P40424 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PBX1P40424 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PBX1P40424 RNU6-23P-201ENST00000363283 107 ntBASIC2.23□□□□□ -2.05
PBX1P40424 Y_RNA.188-201ENST00000363952 111 ntBASIC2.23□□□□□ -2.05
PBX1P40424 RNU6-514P-201ENST00000384208 107 ntBASIC2.23□□□□□ -2.05
PBX1P40424 Y_RNA.478-201ENST00000384358 107 ntBASIC2.23□□□□□ -2.05
PBX1P40424 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PBX1P40424 RN7SKP223-201ENST00000410582 62 ntBASIC2.23□□□□□ -2.05
PBX1P40424 AC010154.1-201ENST00000425857 269 ntBASIC2.23□□□□□ -2.05
PBX1P40424 ATP5J2P3-201ENST00000451550 258 ntBASIC2.23□□□□□ -2.05
PBX1P40424 snoU13.23-201ENST00000458863 104 ntBASIC2.23□□□□□ -2.05
PBX1P40424 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.23□□□□□ -2.05
PBX1P40424 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.23□□□□□ -2.05
PBX1P40424 AC121758.2-201ENST00000553271 193 ntBASIC2.23□□□□□ -2.05
PBX1P40424 AL137100.2-201ENST00000555786 315 ntBASIC2.23□□□□□ -2.05
PBX1P40424 MIR3935-201ENST00000583472 104 ntBASIC2.23□□□□□ -2.05
PBX1P40424 AC002984.1-201ENST00000591692 448 ntBASIC2.23□□□□□ -2.05
PBX1P40424 SNORD14A-201ENST00000606526 91 ntBASIC2.23□□□□□ -2.05
PBX1P40424 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.23□□□□□ -2.05
PBX1P40424 CENPCP1-201ENST00000533085 2578 ntBASIC2.23□□□□□ -2.05
PBX1P40424 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PBX1P40424 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PBX1P40424 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.22□□□□□ -2.05
PBX1P40424 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
PBX1P40424 snoU2-30.2-201ENST00000362805 70 ntBASIC2.22□□□□□ -2.05
PBX1P40424 SNORD115-3-201ENST00000363100 82 ntBASIC2.22□□□□□ -2.05
PBX1P40424 Y_RNA.307-201ENST00000365022 117 ntBASIC2.22□□□□□ -2.05
PBX1P40424 HMGN2P39-201ENST00000398005 273 ntBASIC2.22□□□□□ -2.05
PBX1P40424 RNA5SP270-201ENST00000411361 118 ntBASIC2.22□□□□□ -2.05
PBX1P40424 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
PBX1P40424 HMGN2P34-201ENST00000437647 269 ntBASIC2.22□□□□□ -2.05
PBX1P40424 AC011753.1-201ENST00000451001 220 ntBASIC2.22□□□□□ -2.05
PBX1P40424 HSPE1P13-201ENST00000451143 297 ntBASIC2.22□□□□□ -2.05
PBX1P40424 AL139109.1-201ENST00000455491 297 ntBASIC2.22□□□□□ -2.05
PBX1P40424 RNA5SP20-201ENST00000515976 84 ntBASIC2.22□□□□□ -2.05
PBX1P40424 RNU6-191P-201ENST00000516295 94 ntBASIC2.22□□□□□ -2.05
PBX1P40424 MIR5089-201ENST00000580047 84 ntBASIC2.22□□□□□ -2.05
PBX1P40424 MIR3145-201ENST00000580727 82 ntBASIC2.22□□□□□ -2.05
PBX1P40424 U2.14-201ENST00000615943 113 ntBASIC2.22□□□□□ -2.05
PBX1P40424 MIR338-201ENST00000636369 67 ntBASIC2.22□□□□□ -2.05
PBX1P40424 UBE2WP1-201ENST00000362030 340 ntBASIC2.21□□□□□ -2.06
PBX1P40424 RNU4-80P-201ENST00000363200 141 ntBASIC2.21□□□□□ -2.06
PBX1P40424 Y_RNA.447-201ENST00000384184 113 ntBASIC2.21□□□□□ -2.06
PBX1P40424 AL023284.1-201ENST00000403956 276 ntBASIC2.21□□□□□ -2.06
PBX1P40424 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.21□□□□□ -2.06
PBX1P40424 RPS26P55-201ENST00000471178 356 ntBASIC2.21□□□□□ -2.06
PBX1P40424 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.21□□□□□ -2.06
PBX1P40424 AC091959.1-201ENST00000495857 238 ntBASIC2.21□□□□□ -2.06
PBX1P40424 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.21□□□□□ -2.06
PBX1P40424 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.21□□□□□ -2.06
PBX1P40424 RNU6-1041P-201ENST00000516254 102 ntBASIC2.21□□□□□ -2.06
PBX1P40424 SNORA27.4-201ENST00000516650 95 ntBASIC2.21□□□□□ -2.06
PBX1P40424 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
PBX1P40424 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
PBX1P40424 AL512605.2-201ENST00000592972 256 ntBASIC2.21□□□□□ -2.06
PBX1P40424 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.21□□□□□ -2.06
PBX1P40424 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
PBX1P40424 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
PBX1P40424 Y_RNA.44-201ENST00000362676 108 ntBASIC2.2□□□□□ -2.06
PBX1P40424 Y_RNA.287-201ENST00000364853 94 ntBASIC2.2□□□□□ -2.06
PBX1P40424 RNU6-407P-201ENST00000365280 104 ntBASIC2.2□□□□□ -2.06
PBX1P40424 Y_RNA.416-201ENST00000384014 113 ntBASIC2.2□□□□□ -2.06
PBX1P40424 Y_RNA.489-201ENST00000384410 101 ntBASIC2.2□□□□□ -2.06
PBX1P40424 MIR518A2-201ENST00000384966 87 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms