Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 Y_RNA.618-201ENST00000410949 107 ntBASIC1.96□□□□□ -2.1
RPL3P39023 RNU6-651P-201ENST00000411040 105 ntBASIC1.96□□□□□ -2.1
RPL3P39023 ATP5J2P3-201ENST00000451550 258 ntBASIC1.96□□□□□ -2.1
RPL3P39023 MTND4LP30-201ENST00000454092 297 ntBASIC1.96□□□□□ -2.1
RPL3P39023 AL139109.1-201ENST00000455491 297 ntBASIC1.96□□□□□ -2.1
RPL3P39023 RNU6-1271P-201ENST00000517049 105 ntBASIC1.96□□□□□ -2.1
RPL3P39023 SUMO2P18-201ENST00000518873 252 ntBASIC1.96□□□□□ -2.1
RPL3P39023 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.96□□□□□ -2.1
RPL3P39023 MIR3684-201ENST00000579779 74 ntBASIC1.96□□□□□ -2.1
RPL3P39023 MIR4672-201ENST00000583126 81 ntBASIC1.96□□□□□ -2.1
RPL3P39023 AL353149.1-201ENST00000610667 244 ntBASIC1.96□□□□□ -2.1
RPL3P39023 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPL3P39023 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.96□□□□□ -2.1
RPL3P39023 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RPL3P39023 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPL3P39023 SNORA25.1-201ENST00000362326 128 ntBASIC1.95□□□□□ -2.1
RPL3P39023 SNORD114-7-201ENST00000362520 77 ntBASIC1.95□□□□□ -2.1
RPL3P39023 Y_RNA.111-201ENST00000363248 100 ntBASIC1.95□□□□□ -2.1
RPL3P39023 RNU6-23P-201ENST00000363283 107 ntBASIC1.95□□□□□ -2.1
RPL3P39023 Y_RNA.352-201ENST00000365439 102 ntBASIC1.95□□□□□ -2.1
RPL3P39023 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
RPL3P39023 MIR518A2-201ENST00000384966 87 ntBASIC1.95□□□□□ -2.1
RPL3P39023 MIR597-201ENST00000384968 97 ntBASIC1.95□□□□□ -2.1
RPL3P39023 AC099677.2-201ENST00000436385 175 ntBASIC1.95□□□□□ -2.1
RPL3P39023 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
RPL3P39023 SUMO1P2-201ENST00000452524 304 ntBASIC1.95□□□□□ -2.1
RPL3P39023 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.95□□□□□ -2.1
RPL3P39023 RPS26P55-201ENST00000471178 356 ntBASIC1.95□□□□□ -2.1
RPL3P39023 RNA5SP20-201ENST00000515976 84 ntBASIC1.95□□□□□ -2.1
RPL3P39023 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.95□□□□□ -2.1
RPL3P39023 AC006435.5-201ENST00000624486 112 ntBASIC1.95□□□□□ -2.1
RPL3P39023 MIR203B-201ENST00000636080 86 ntBASIC1.95□□□□□ -2.1
RPL3P39023 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
RPL3P39023 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.94□□□□□ -2.1
RPL3P39023 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL3P39023 UBE2WP1-201ENST00000362030 340 ntBASIC1.94□□□□□ -2.1
RPL3P39023 Y_RNA.44-201ENST00000362676 108 ntBASIC1.94□□□□□ -2.1
RPL3P39023 RNU6-379P-201ENST00000363813 104 ntBASIC1.94□□□□□ -2.1
RPL3P39023 Y_RNA.275-201ENST00000364726 110 ntBASIC1.94□□□□□ -2.1
RPL3P39023 Y_RNA.277-201ENST00000364754 102 ntBASIC1.94□□□□□ -2.1
RPL3P39023 RNU6-117P-201ENST00000365415 107 ntBASIC1.94□□□□□ -2.1
RPL3P39023 Y_RNA.416-201ENST00000384014 113 ntBASIC1.94□□□□□ -2.1
RPL3P39023 RNU6-662P-201ENST00000384253 104 ntBASIC1.94□□□□□ -2.1
RPL3P39023 SNORD116-13-201ENST00000384408 92 ntBASIC1.94□□□□□ -2.1
RPL3P39023 RNA5SP467-201ENST00000391274 118 ntBASIC1.94□□□□□ -2.1
RPL3P39023 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL3P39023 RNU6-1023P-201ENST00000516137 106 ntBASIC1.94□□□□□ -2.1
RPL3P39023 RNU6-1337P-201ENST00000516525 95 ntBASIC1.94□□□□□ -2.1
RPL3P39023 SNORA27.4-201ENST00000516650 95 ntBASIC1.94□□□□□ -2.1
RPL3P39023 RNU7-193P-201ENST00000516723 65 ntBASIC1.94□□□□□ -2.1
RPL3P39023 SNORA31.25-201ENST00000517242 134 ntBASIC1.94□□□□□ -2.1
RPL3P39023 RNU7-128P-201ENST00000517247 62 ntBASIC1.94□□□□□ -2.1
RPL3P39023 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.94□□□□□ -2.1
RPL3P39023 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.94□□□□□ -2.1
RPL3P39023 MIR1273D-201ENST00000577266 86 ntBASIC1.94□□□□□ -2.1
RPL3P39023 SNORD53-201ENST00000579969 78 ntBASIC1.94□□□□□ -2.1
RPL3P39023 AC037487.3-201ENST00000606668 112 ntBASIC1.94□□□□□ -2.1
RPL3P39023 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.94□□□□□ -2.1
RPL3P39023 U6.108-201ENST00000637764 58 ntBASIC1.94□□□□□ -2.1
RPL3P39023 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
RPL3P39023 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
RPL3P39023 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPL3P39023 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
RPL3P39023 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RPL3P39023 AL356292.1-201ENST00000283110 373 ntBASIC1.93□□□□□ -2.1
RPL3P39023 Y_RNA.20-201ENST00000362479 113 ntBASIC1.93□□□□□ -2.1
RPL3P39023 RNU6-862P-201ENST00000362804 105 ntBASIC1.93□□□□□ -2.1
RPL3P39023 Y_RNA.117-201ENST00000363294 101 ntBASIC1.93□□□□□ -2.1
RPL3P39023 SNORD27-201ENST00000363981 72 ntBASIC1.93□□□□□ -2.1
RPL3P39023 RNU6-801P-201ENST00000364087 105 ntBASIC1.93□□□□□ -2.1
RPL3P39023 Y_RNA.217-201ENST00000364214 105 ntBASIC1.93□□□□□ -2.1
RPL3P39023 RNU6-740P-201ENST00000364734 105 ntBASIC1.93□□□□□ -2.1
RPL3P39023 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
RPL3P39023 Y_RNA.310-201ENST00000365063 113 ntBASIC1.93□□□□□ -2.1
RPL3P39023 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
RPL3P39023 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
RPL3P39023 MIR548H3-201ENST00000408771 118 ntBASIC1.93□□□□□ -2.1
RPL3P39023 RNA5SP270-201ENST00000411361 118 ntBASIC1.93□□□□□ -2.1
RPL3P39023 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPL3P39023 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
RPL3P39023 HMGN2P3-201ENST00000433603 273 ntBASIC1.93□□□□□ -2.1
RPL3P39023 HMGN2P5-201ENST00000436882 273 ntBASIC1.93□□□□□ -2.1
RPL3P39023 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.93□□□□□ -2.1
RPL3P39023 Y_RNA.641-201ENST00000459414 105 ntBASIC1.93□□□□□ -2.1
RPL3P39023 RPS27P22-201ENST00000478056 241 ntBASIC1.93□□□□□ -2.1
RPL3P39023 YWHAEP4-201ENST00000505390 198 ntBASIC1.93□□□□□ -2.1
RPL3P39023 AC097462.1-201ENST00000514125 324 ntBASIC1.93□□□□□ -2.1
RPL3P39023 RNU6-63P-201ENST00000516690 95 ntBASIC1.93□□□□□ -2.1
RPL3P39023 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.93□□□□□ -2.1
RPL3P39023 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.93□□□□□ -2.1
RPL3P39023 U6.73-201ENST00000619194 103 ntBASIC1.93□□□□□ -2.1
RPL3P39023 AC068700.1-201ENST00000565862 3754 ntBASIC1.93□□□□□ -2.1
RPL3P39023 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
RPL3P39023 MIR449A-201ENST00000362113 91 ntBASIC1.92□□□□□ -2.1
RPL3P39023 Y_RNA.54-201ENST00000362766 105 ntBASIC1.92□□□□□ -2.1
RPL3P39023 RNU1-22P-201ENST00000363334 158 ntBASIC1.92□□□□□ -2.1
RPL3P39023 RNU6-271P-201ENST00000363858 105 ntBASIC1.92□□□□□ -2.1
RPL3P39023 Y_RNA.368-201ENST00000365547 113 ntBASIC1.92□□□□□ -2.1
RPL3P39023 RNU6-514P-201ENST00000384208 107 ntBASIC1.92□□□□□ -2.1
RPL3P39023 RNU6-855P-201ENST00000410395 104 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms