Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 COX6CP10-201ENST00000416832 224 ntBASIC2.01□□□□□ -2.09
CHKAP35790 MTCO2P12-201ENST00000427426 682 ntBASIC2.01□□□□□ -2.09
CHKAP35790 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.01□□□□□ -2.09
CHKAP35790 RPS27P1-201ENST00000450552 247 ntBASIC2.01□□□□□ -2.09
CHKAP35790 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.01□□□□□ -2.09
CHKAP35790 AL163540.1-201ENST00000485382 386 ntBASIC2.01□□□□□ -2.09
CHKAP35790 AC008834.1-201ENST00000511612 175 ntBASIC2.01□□□□□ -2.09
CHKAP35790 RNU6-1278P-201ENST00000516130 107 ntBASIC2.01□□□□□ -2.09
CHKAP35790 AC022441.3-201ENST00000605737 136 ntBASIC2.01□□□□□ -2.09
CHKAP35790 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2□□□□□ -2.09
CHKAP35790 AC018630.2-201ENST00000534866 2403 ntBASIC2□□□□□ -2.09
CHKAP35790 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
CHKAP35790 AC091812.1-201ENST00000432235 1948 ntBASIC2□□□□□ -2.09
CHKAP35790 Y_RNA.31-201ENST00000362574 102 ntBASIC2□□□□□ -2.09
CHKAP35790 Y_RNA.101-201ENST00000363154 102 ntBASIC2□□□□□ -2.09
CHKAP35790 AC117470.1-201ENST00000381974 330 ntBASIC2□□□□□ -2.09
CHKAP35790 Y_RNA.439-201ENST00000384119 94 ntBASIC2□□□□□ -2.09
CHKAP35790 Y_RNA.570-201ENST00000384750 101 ntBASIC2□□□□□ -2.09
CHKAP35790 MIR548P-201ENST00000408336 84 ntBASIC2□□□□□ -2.09
CHKAP35790 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2□□□□□ -2.09
CHKAP35790 AL445685.2-201ENST00000422551 342 ntBASIC2□□□□□ -2.09
CHKAP35790 AC005002.2-201ENST00000438228 269 ntBASIC2□□□□□ -2.09
CHKAP35790 JTBP1-201ENST00000441314 247 ntBASIC2□□□□□ -2.09
CHKAP35790 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2□□□□□ -2.09
CHKAP35790 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2□□□□□ -2.09
CHKAP35790 AC015712.3-201ENST00000559380 164 ntBASIC2□□□□□ -2.09
CHKAP35790 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
CHKAP35790 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2□□□□□ -2.09
CHKAP35790 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CHKAP35790 Y_RNA.148-201ENST00000363557 117 ntBASIC1.99□□□□□ -2.09
CHKAP35790 Y_RNA.394-201ENST00000383942 103 ntBASIC1.99□□□□□ -2.09
CHKAP35790 Y_RNA.446-201ENST00000384178 104 ntBASIC1.99□□□□□ -2.09
CHKAP35790 RNU6-439P-201ENST00000384188 106 ntBASIC1.99□□□□□ -2.09
CHKAP35790 RNU6-308P-201ENST00000390957 107 ntBASIC1.99□□□□□ -2.09
CHKAP35790 RNA5SP109-201ENST00000391010 116 ntBASIC1.99□□□□□ -2.09
CHKAP35790 RPL21P1-201ENST00000399532 476 ntBASIC1.99□□□□□ -2.09
CHKAP35790 MRPL42P3-201ENST00000401492 326 ntBASIC1.99□□□□□ -2.09
CHKAP35790 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
CHKAP35790 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
CHKAP35790 RN7SL274P-201ENST00000492268 272 ntBASIC1.99□□□□□ -2.09
CHKAP35790 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
CHKAP35790 Y_RNA.721-201ENST00000517207 102 ntBASIC1.99□□□□□ -2.09
CHKAP35790 AC022616.4-201ENST00000522985 181 ntBASIC1.99□□□□□ -2.09
CHKAP35790 AC110588.1-201ENST00000559699 137 ntBASIC1.99□□□□□ -2.09
CHKAP35790 MIR4709-201ENST00000577272 72 ntBASIC1.99□□□□□ -2.09
CHKAP35790 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKAP35790 AC073413.2-201ENST00000604332 360 ntBASIC1.99□□□□□ -2.09
CHKAP35790 AC022217.4-201ENST00000604389 163 ntBASIC1.99□□□□□ -2.09
CHKAP35790 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKAP35790 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHKAP35790 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CHKAP35790 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CHKAP35790 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHKAP35790 SNORD63-201ENST00000384262 68 ntBASIC1.98□□□□□ -2.09
CHKAP35790 AL031003.1-201ENST00000404229 172 ntBASIC1.98□□□□□ -2.09
CHKAP35790 MIR1267-201ENST00000408723 78 ntBASIC1.98□□□□□ -2.09
CHKAP35790 RNU2-20P-201ENST00000410425 191 ntBASIC1.98□□□□□ -2.09
CHKAP35790 AC245047.3-201ENST00000429428 127 ntBASIC1.98□□□□□ -2.09
CHKAP35790 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.98□□□□□ -2.09
CHKAP35790 RPEP5-201ENST00000441137 268 ntBASIC1.98□□□□□ -2.09
CHKAP35790 HSPE1P13-201ENST00000451143 297 ntBASIC1.98□□□□□ -2.09
CHKAP35790 AC108210.2-201ENST00000503681 201 ntBASIC1.98□□□□□ -2.09
CHKAP35790 Y_RNA.711-201ENST00000516993 102 ntBASIC1.98□□□□□ -2.09
CHKAP35790 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
CHKAP35790 AC127459.3-201ENST00000624328 466 ntBASIC1.98□□□□□ -2.09
CHKAP35790 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
CHKAP35790 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHKAP35790 RNU6-1175P-201ENST00000365200 107 ntBASIC1.97□□□□□ -2.09
CHKAP35790 RNU6-117P-201ENST00000365415 107 ntBASIC1.97□□□□□ -2.09
CHKAP35790 Y_RNA.471-201ENST00000384312 102 ntBASIC1.97□□□□□ -2.09
CHKAP35790 Y_RNA.551-201ENST00000384661 102 ntBASIC1.97□□□□□ -2.09
CHKAP35790 RN7SKP200-201ENST00000410564 320 ntBASIC1.97□□□□□ -2.09
CHKAP35790 RNU6-1199P-201ENST00000411249 104 ntBASIC1.97□□□□□ -2.09
CHKAP35790 RPL23AP36-201ENST00000413895 458 ntBASIC1.97□□□□□ -2.09
CHKAP35790 AL354751.2-201ENST00000415471 210 ntBASIC1.97□□□□□ -2.09
CHKAP35790 MTND1P14-201ENST00000427400 950 ntBASIC1.97□□□□□ -2.09
CHKAP35790 AC005042.3-201ENST00000453230 174 ntBASIC1.97□□□□□ -2.09
CHKAP35790 RNU6-237P-201ENST00000515985 71 ntBASIC1.97□□□□□ -2.09
CHKAP35790 RNU6-155P-201ENST00000516347 100 ntBASIC1.97□□□□□ -2.09
CHKAP35790 RNU6-548P-201ENST00000517083 115 ntBASIC1.97□□□□□ -2.09
CHKAP35790 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.97□□□□□ -2.09
CHKAP35790 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.97□□□□□ -2.09
CHKAP35790 MIR6079-201ENST00000635807 62 ntBASIC1.97□□□□□ -2.09
CHKAP35790 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.09
CHKAP35790 Y_RNA.124-201ENST00000363339 93 ntBASIC1.96□□□□□ -2.1
CHKAP35790 Y_RNA.138-201ENST00000363462 102 ntBASIC1.96□□□□□ -2.1
CHKAP35790 SNORA4.2-201ENST00000365313 147 ntBASIC1.96□□□□□ -2.1
CHKAP35790 RNU6-376P-201ENST00000384731 106 ntBASIC1.96□□□□□ -2.1
CHKAP35790 SNORA40.18-201ENST00000391200 128 ntBASIC1.96□□□□□ -2.1
CHKAP35790 MIR934-201ENST00000401241 83 ntBASIC1.96□□□□□ -2.1
CHKAP35790 AL606517.2-201ENST00000442855 241 ntBASIC1.96□□□□□ -2.1
CHKAP35790 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.96□□□□□ -2.1
CHKAP35790 AC107393.1-201ENST00000512403 346 ntBASIC1.96□□□□□ -2.1
CHKAP35790 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.96□□□□□ -2.1
CHKAP35790 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.96□□□□□ -2.1
CHKAP35790 AL162424.1-201ENST00000602325 221 ntBASIC1.96□□□□□ -2.1
CHKAP35790 MIR6845-201ENST00000613182 61 ntBASIC1.96□□□□□ -2.1
CHKAP35790 MIR8054-201ENST00000620877 86 ntBASIC1.96□□□□□ -2.1
CHKAP35790 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHKAP35790 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms