Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL603825.1-201ENST00000438481 80 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 TRBVB-201ENST00000477100 408 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 RNA5SP20-201ENST00000515976 84 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.64□□□□□ -1.99
CNGA1P29973 AC023157.2-201ENST00000540596 141 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 MIR4438-201ENST00000585271 93 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 DEFB117-201ENST00000602356 141 ntBASIC2.64□□□□□ -1.99
CNGA1P29973 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CNGA1P29973 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.63□□□□□ -1.99
CNGA1P29973 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 Y_RNA.144-201ENST00000363521 113 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 RNU1-96P-201ENST00000364163 162 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 RNU6-407P-201ENST00000365280 104 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 RNU6-505P-201ENST00000384427 107 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 MIR515-2-201ENST00000384883 83 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 MIR515-1-201ENST00000384884 83 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 MIR144-201ENST00000384886 86 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 MIR1302-6-201ENST00000408466 90 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.63□□□□□ -1.99
CNGA1P29973 RPS27P22-201ENST00000478056 241 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.63□□□□□ -1.99
CNGA1P29973 RNA5SP82-201ENST00000516707 92 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 AC078899.2-201ENST00000595282 212 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 AP001282.2-201ENST00000616149 309 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.63□□□□□ -1.99
CNGA1P29973 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.62□□□□□ -1.99
CNGA1P29973 AC010615.1-201ENST00000594254 1764 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CNGA1P29973 SNORA33-201ENST00000363664 130 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 Y_RNA.396-201ENST00000383949 103 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 Y_RNA.418-201ENST00000384029 102 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 RNU6-196P-201ENST00000384315 107 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 Y_RNA.483-201ENST00000384380 101 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 Y_RNA.556-201ENST00000384677 113 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 Y_RNA.569-201ENST00000384749 103 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 SNORA11.4-201ENST00000408823 129 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 RNA5SP501-201ENST00000410990 112 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 HSPE1P13-201ENST00000451143 297 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 AC097462.1-201ENST00000514125 324 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 Y_RNA.676-201ENST00000516393 96 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 RNU7-128P-201ENST00000517247 62 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.62□□□□□ -1.99
CNGA1P29973 AC067747.1-201ENST00000608026 250 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 U6.104-201ENST00000637979 90 ntBASIC2.62□□□□□ -1.99
CNGA1P29973 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CNGA1P29973 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
CNGA1P29973 Y_RNA.16-201ENST00000362421 102 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 RNU1-22P-201ENST00000363334 158 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 SNORA16B-201ENST00000364674 135 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 RNU6-463P-201ENST00000384340 107 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 SNORA64-201ENST00000384674 134 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 RNA5SP467-201ENST00000391274 118 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 RNA5SP458-201ENST00000516188 119 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 RNVU1-2-201ENST00000516326 135 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 RNU6-1338P-201ENST00000516328 91 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 MIR3145-201ENST00000580727 82 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 AC007229.1-201ENST00000590455 412 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 7SK.10-201ENST00000621414 298 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 U6.108-201ENST00000637764 58 ntBASIC2.61□□□□□ -1.99
CNGA1P29973 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CNGA1P29973 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CNGA1P29973 MIR21-201ENST00000362134 72 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 RNU6-326P-201ENST00000365480 107 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 SNORA53-201ENST00000391141 249 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.6□□□□□ -1.99
CNGA1P29973 AC018634.1-201ENST00000437554 401 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 RPL23AP42-201ENST00000471152 471 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 RNU2-31P-201ENST00000516954 155 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.6□□□□□ -1.99
CNGA1P29973 AC024995.1-201ENST00000523014 93 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 MIR4503-201ENST00000582187 83 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 AC069114.2-201ENST00000604699 304 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 AL359075.3-201ENST00000613288 217 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.6□□□□□ -1.99
CNGA1P29973 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CNGA1P29973 AC245060.5-201ENST00000610778 3293 ntBASIC2.6□□□□□ -1.99
CNGA1P29973 RNU4-80P-201ENST00000363200 141 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 RNU1-51P-201ENST00000365345 176 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 RNU6-117P-201ENST00000365415 107 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 SNORA67.3-201ENST00000384366 140 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 RNU6-710P-201ENST00000410424 105 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 EBAG9P1-201ENST00000418955 543 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 MTND4LP30-201ENST00000454092 297 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.59□□□□□ -1.99
CNGA1P29973 MIR5094-201ENST00000578766 85 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
CNGA1P29973 U1.36-201ENST00000620684 176 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.59□□□□□ -1.99
CNGA1P29973 AL356292.1-201ENST00000283110 373 ntBASIC2.58□□□□□ -2
CNGA1P29973 MIR335-201ENST00000362173 94 ntBASIC2.58□□□□□ -2
CNGA1P29973 AC010154.1-201ENST00000425857 269 ntBASIC2.58□□□□□ -2
CNGA1P29973 AC024067.1-201ENST00000426199 223 ntBASIC2.58□□□□□ -2
CNGA1P29973 MTCO1P5-201ENST00000433573 344 ntBASIC2.58□□□□□ -2
CNGA1P29973 RPS15AP28-201ENST00000435088 386 ntBASIC2.58□□□□□ -2
CNGA1P29973 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.58□□□□□ -2
CNGA1P29973 RPS26P45-201ENST00000471748 340 ntBASIC2.58□□□□□ -2
CNGA1P29973 Y_RNA.668-201ENST00000516233 93 ntBASIC2.58□□□□□ -2
CNGA1P29973 RNU7-99P-201ENST00000516271 62 ntBASIC2.58□□□□□ -2
CNGA1P29973 RNU6-1337P-201ENST00000516525 95 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 274.3 ms