Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MIR4790-201ENST00000577799 79 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 AC100812.1-201ENST00000607622 580 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 U6.115-201ENST00000636045 103 ntBASIC0.66□□□□□ -2.3
HLA-DMAP28067 SNORA27.1-201ENST00000362604 124 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 RNY1P16-201ENST00000363063 111 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 RNU4-41P-201ENST00000364426 143 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 Y_RNA.338-201ENST00000365320 114 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 RNU6-53P-201ENST00000365367 106 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 RNU6-318P-201ENST00000384283 103 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 MIR526A1-201ENST00000384897 85 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 AL353997.1-201ENST00000432936 108 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 MTATP6P26-201ENST00000445926 662 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 RNU6-329P-201ENST00000459618 107 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.65□□□□□ -2.31
HLA-DMAP28067 SNORD79.1-201ENST00000516069 84 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.65□□□□□ -2.31
HLA-DMAP28067 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.65□□□□□ -2.31
HLA-DMAP28067 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.65□□□□□ -2.31
HLA-DMAP28067 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.65□□□□□ -2.31
HLA-DMAP28067 EIF1P4-201ENST00000572664 335 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.65□□□□□ -2.31
HLA-DMAP28067 AL162424.1-201ENST00000602325 221 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 AC018462.2-201ENST00000605375 395 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 AL359821.1-201ENST00000605519 182 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 MIR3688-2-201ENST00000636963 87 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 AC073544.1-201ENST00000600110 1595 ntBASIC0.65□□□□□ -2.31
HLA-DMAP28067 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HLA-DMAP28067 Y_RNA.2-201ENST00000362330 96 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 RNU6-117P-201ENST00000365415 107 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 Y_RNA.358-201ENST00000365491 99 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 RNU6-969P-201ENST00000383900 105 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 Y_RNA.453-201ENST00000384223 109 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 Y_RNA.594-201ENST00000410373 140 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 RNU6-1050P-201ENST00000410388 107 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DMAP28067 AL137792.2-201ENST00000443484 235 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 UQCRBP2-201ENST00000447827 297 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 PCNPP5-201ENST00000452246 481 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC233266.1-201ENST00000454518 96 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 RPL7P42-201ENST00000481005 679 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DMAP28067 RNU6-341P-201ENST00000516973 96 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC090142.3-201ENST00000519012 385 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC018448.1-201ENST00000552843 316 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AL121579.1-201ENST00000555129 305 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC090617.3-201ENST00000573670 475 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 MIR3192-201ENST00000584920 77 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC242852.1-201ENST00000612151 96 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC093783.1-201ENST00000612976 329 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC244015.1-201ENST00000622301 99 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC006435.5-201ENST00000624486 112 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 AC068137.4-201ENST00000638485 296 ntBASIC0.64□□□□□ -2.31
HLA-DMAP28067 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
HLA-DMAP28067 RNU6-879P-201ENST00000364328 108 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 Y_RNA.364-201ENST00000365532 101 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 Y_RNA.404-201ENST00000383978 102 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 RNU6-1013P-201ENST00000384180 107 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 Y_RNA.490-201ENST00000384413 102 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 Y_RNA.498-201ENST00000384460 102 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 RNU6-376P-201ENST00000384731 106 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 RNU5A-5P-201ENST00000411054 116 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.63□□□□□ -2.31
HLA-DMAP28067 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DMAP28067 AL049830.1-201ENST00000468034 425 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DMAP28067 AC022493.2-201ENST00000506122 481 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 TRMT112P2-201ENST00000512910 132 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 RNU6-237P-201ENST00000515985 71 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 RNU6-120P-201ENST00000516077 103 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 RNU6-718P-201ENST00000516166 105 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 RNU2-56P-201ENST00000516826 190 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 AC105029.1-201ENST00000520250 669 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DMAP28067 RPL21P9-201ENST00000556149 474 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.63□□□□□ -2.31
HLA-DMAP28067 AC055872.1-201ENST00000570978 278 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 PRELID3BP2-201ENST00000605362 201 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 SNORA28-201ENST00000606769 126 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 AL096861.1-201ENST00000610899 123 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 AC090517.2-201ENST00000614966 680 ntBASIC0.63□□□□□ -2.31
HLA-DMAP28067 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HLA-DMAP28067 Y_RNA.86-201ENST00000363020 111 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 Y_RNA.157-201ENST00000363638 102 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 SNORA2.2-201ENST00000365473 135 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 RNU6-1264P-201ENST00000383891 107 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 SNORA75.2-201ENST00000391138 150 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 SNORA75.3-201ENST00000391231 150 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 MTCYBP4-201ENST00000401524 249 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 MIR548K-201ENST00000408406 116 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 MIR548F5-201ENST00000408421 86 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 RNA5SP511-201ENST00000410487 115 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 AC009161.1-201ENST00000417306 376 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 RPEP5-201ENST00000441137 268 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 AC069439.1-201ENST00000494739 167 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 AC022868.1-201ENST00000517767 391 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 MIR6857-201ENST00000613267 93 ntBASIC0.62□□□□□ -2.31
HLA-DMAP28067 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms