Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
POLR2AP24928 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.58□□□□□ -2
POLR2AP24928 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
POLR2AP24928 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
POLR2AP24928 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.58□□□□□ -2
POLR2AP24928 Y_RNA.71-201ENST00000362892 104 ntBASIC2.58□□□□□ -2
POLR2AP24928 Y_RNA.287-201ENST00000364853 94 ntBASIC2.58□□□□□ -2
POLR2AP24928 RNY3P5-201ENST00000384127 102 ntBASIC2.58□□□□□ -2
POLR2AP24928 MIR1283-1-201ENST00000408494 87 ntBASIC2.58□□□□□ -2
POLR2AP24928 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.58□□□□□ -2
POLR2AP24928 CYCSP49-201ENST00000420810 319 ntBASIC2.58□□□□□ -2
POLR2AP24928 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.58□□□□□ -2
POLR2AP24928 RNU6-191P-201ENST00000516295 94 ntBASIC2.58□□□□□ -2
POLR2AP24928 AC026241.1-201ENST00000517873 2142 ntBASIC2.58□□□□□ -2
POLR2AP24928 AC067747.1-201ENST00000608026 250 ntBASIC2.58□□□□□ -2
POLR2AP24928 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.58□□□□□ -2
POLR2AP24928 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.58□□□□□ -2
POLR2AP24928 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.57□□□□□ -2
POLR2AP24928 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
POLR2AP24928 SNORA18.2-201ENST00000383865 132 ntBASIC2.57□□□□□ -2
POLR2AP24928 RNU6-449P-201ENST00000383914 107 ntBASIC2.57□□□□□ -2
POLR2AP24928 Y_RNA.563-201ENST00000384707 108 ntBASIC2.57□□□□□ -2
POLR2AP24928 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.57□□□□□ -2
POLR2AP24928 AC074290.1-201ENST00000448883 135 ntBASIC2.57□□□□□ -2
POLR2AP24928 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.57□□□□□ -2
POLR2AP24928 SCARNA8-201ENST00000515924 131 ntBASIC2.57□□□□□ -2
POLR2AP24928 RNU5F-4P-201ENST00000516581 114 ntBASIC2.57□□□□□ -2
POLR2AP24928 RNU6-295P-201ENST00000516901 104 ntBASIC2.57□□□□□ -2
POLR2AP24928 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.57□□□□□ -2
POLR2AP24928 U6.115-201ENST00000636045 103 ntBASIC2.57□□□□□ -2
POLR2AP24928 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
POLR2AP24928 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
POLR2AP24928 AC010332.2-201ENST00000613083 1904 ntBASIC2.57□□□□□ -2
POLR2AP24928 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
POLR2AP24928 RNU6-597P-201ENST00000365620 102 ntBASIC2.56□□□□□ -2
POLR2AP24928 RNU6-381P-201ENST00000391259 108 ntBASIC2.56□□□□□ -2
POLR2AP24928 RNU2-37P-201ENST00000410695 177 ntBASIC2.56□□□□□ -2
POLR2AP24928 RNU6-321P-201ENST00000410912 106 ntBASIC2.56□□□□□ -2
POLR2AP24928 RNU2-55P-201ENST00000411146 174 ntBASIC2.56□□□□□ -2
POLR2AP24928 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.56□□□□□ -2
POLR2AP24928 RNU6-1211P-201ENST00000459179 105 ntBASIC2.56□□□□□ -2
POLR2AP24928 POLR3GP1-201ENST00000594073 261 ntBASIC2.56□□□□□ -2
POLR2AP24928 U3.9-201ENST00000363823 204 ntBASIC2.56□□□□□ -2
POLR2AP24928 RNU4-10P-201ENST00000364383 140 ntBASIC2.56□□□□□ -2
POLR2AP24928 SNORD13-201ENST00000459299 104 ntBASIC2.56□□□□□ -2
POLR2AP24928 SNORA25.12-201ENST00000516202 82 ntBASIC2.56□□□□□ -2
POLR2AP24928 RNA5SP200-201ENST00000516360 103 ntBASIC2.56□□□□□ -2
POLR2AP24928 RNU2-58P-201ENST00000516403 183 ntBASIC2.56□□□□□ -2
POLR2AP24928 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.56□□□□□ -2
POLR2AP24928 AC103810.1-201ENST00000579873 453 ntBASIC2.56□□□□□ -2
POLR2AP24928 AP003357.1-201ENST00000604497 148 ntBASIC2.56□□□□□ -2
POLR2AP24928 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.55□□□□□ -2
POLR2AP24928 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
POLR2AP24928 RNU6-257P-201ENST00000410238 98 ntBASIC2.55□□□□□ -2
POLR2AP24928 U8.19-201ENST00000459095 133 ntBASIC2.55□□□□□ -2
POLR2AP24928 AC022616.8-201ENST00000533569 253 ntBASIC2.55□□□□□ -2
POLR2AP24928 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.55□□□□□ -2
POLR2AP24928 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
POLR2AP24928 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
POLR2AP24928 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.55□□□□□ -2
POLR2AP24928 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.55□□□□□ -2
POLR2AP24928 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.54□□□□□ -2
POLR2AP24928 Y_RNA.118-201ENST00000363300 101 ntBASIC2.54□□□□□ -2
POLR2AP24928 RNU6-1082P-201ENST00000364574 107 ntBASIC2.54□□□□□ -2
POLR2AP24928 Y_RNA.542-201ENST00000384641 111 ntBASIC2.54□□□□□ -2
POLR2AP24928 MIR186-201ENST00000384988 86 ntBASIC2.54□□□□□ -2
POLR2AP24928 SNORA40-201ENST00000388090 126 ntBASIC2.54□□□□□ -2
POLR2AP24928 RNU6-750P-201ENST00000390946 107 ntBASIC2.54□□□□□ -2
POLR2AP24928 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
POLR2AP24928 RNU7-115P-201ENST00000516433 55 ntBASIC2.54□□□□□ -2
POLR2AP24928 RNU7-121P-201ENST00000516604 62 ntBASIC2.54□□□□□ -2
POLR2AP24928 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.54□□□□□ -2
POLR2AP24928 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.54□□□□□ -2
POLR2AP24928 AC009127.3-201ENST00000570531 403 ntBASIC2.54□□□□□ -2
POLR2AP24928 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
POLR2AP24928 AC068700.1-201ENST00000565862 3754 ntBASIC2.54□□□□□ -2
POLR2AP24928 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.54□□□□□ -2
POLR2AP24928 RNU6-199P-201ENST00000362954 107 ntBASIC2.54□□□□□ -2
POLR2AP24928 RNU6-944P-201ENST00000364023 107 ntBASIC2.54□□□□□ -2
POLR2AP24928 Y_RNA.273-201ENST00000364703 102 ntBASIC2.54□□□□□ -2
POLR2AP24928 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
POLR2AP24928 RNU6-438P-201ENST00000365561 103 ntBASIC2.54□□□□□ -2
POLR2AP24928 SNORD116-13-201ENST00000384408 92 ntBASIC2.54□□□□□ -2
POLR2AP24928 Y_RNA.498-201ENST00000384460 102 ntBASIC2.54□□□□□ -2
POLR2AP24928 MIR29B2-201ENST00000385055 81 ntBASIC2.54□□□□□ -2
POLR2AP24928 SNORA79-201ENST00000408376 140 ntBASIC2.54□□□□□ -2
POLR2AP24928 U3.40-201ENST00000408706 208 ntBASIC2.54□□□□□ -2
POLR2AP24928 EBAG9P1-201ENST00000418955 543 ntBASIC2.54□□□□□ -2
POLR2AP24928 AC027124.2-201ENST00000428249 105 ntBASIC2.54□□□□□ -2
POLR2AP24928 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
POLR2AP24928 RNU7-23P-201ENST00000459465 62 ntBASIC2.54□□□□□ -2
POLR2AP24928 AC006483.1-201ENST00000487308 313 ntBASIC2.54□□□□□ -2
POLR2AP24928 SCARNA16.3-201ENST00000516595 184 ntBASIC2.54□□□□□ -2
POLR2AP24928 RNU6-197P-201ENST00000516680 100 ntBASIC2.54□□□□□ -2
POLR2AP24928 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.54□□□□□ -2
POLR2AP24928 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
POLR2AP24928 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
POLR2AP24928 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.53□□□□□ -2
POLR2AP24928 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.53□□□□□ -2
POLR2AP24928 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms