Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU6-713P-201ENST00000384761 107 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TNFSF4P23510 RNA5SP109-201ENST00000391010 116 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 AC245047.3-201ENST00000429428 127 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 RPS27P1-201ENST00000450552 247 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 RNU6-327P-201ENST00000516270 127 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 AC136443.5-201ENST00000603741 370 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 AC022217.4-201ENST00000604389 163 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 AL137847.3-201ENST00000611521 109 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 AC099654.10-201ENST00000640395 161 ntBASIC2.08□□□□□ -2.08
TNFSF4P23510 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.08□□□□□ -2.08
TNFSF4P23510 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TNFSF4P23510 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TNFSF4P23510 Y_RNA.64-201ENST00000362845 102 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 RNU6-806P-201ENST00000365147 105 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 RNU6-290P-201ENST00000365212 101 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 Y_RNA.459-201ENST00000384251 102 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 RNU6-102P-201ENST00000384485 104 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 Y_RNA.569-201ENST00000384749 103 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TNFSF4P23510 RNU6-855P-201ENST00000410395 104 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 COX6CP10-201ENST00000416832 224 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 snoU13.27-201ENST00000459278 104 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 SNORA59A-201ENST00000459326 152 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.07□□□□□ -2.08
TNFSF4P23510 RNU6-635P-201ENST00000516651 102 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 RNU6-341P-201ENST00000516973 96 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 AC021269.2-201ENST00000532318 330 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 AL117187.1-201ENST00000555482 181 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 MIR4672-201ENST00000583126 81 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 AC037487.3-201ENST00000606668 112 ntBASIC2.07□□□□□ -2.08
TNFSF4P23510 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TNFSF4P23510 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TNFSF4P23510 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
TNFSF4P23510 Y_RNA.136-201ENST00000363444 102 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 SNORA53-201ENST00000391141 249 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 MIR548F4-201ENST00000408515 105 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 RPL21P38-201ENST00000418090 167 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 AL162725.1-201ENST00000435405 301 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 DYNLT3P2-201ENST00000442517 295 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 HMGN1P10-201ENST00000474557 553 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 AC234781.5-201ENST00000508429 271 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 RNU6-1045P-201ENST00000516321 107 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 RNU6-63P-201ENST00000516690 95 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 SNORD53-201ENST00000579969 78 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 MIR4513-201ENST00000581077 86 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 AC091178.2-201ENST00000584401 117 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 MIR1291-201ENST00000627649 87 ntBASIC2.06□□□□□ -2.08
TNFSF4P23510 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
TNFSF4P23510 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TNFSF4P23510 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TNFSF4P23510 snoU2_19.2-201ENST00000363024 80 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 RNU4-13P-201ENST00000364019 141 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 Y_RNA.368-201ENST00000365547 113 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 Y_RNA.456-201ENST00000384232 111 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 MTND2P23-201ENST00000422990 651 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 MTATP8P1-201ENST00000467115 207 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 AC091021.1-201ENST00000468051 388 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 SNORA44.1-201ENST00000517031 108 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.05□□□□□ -2.08
TNFSF4P23510 MIR4709-201ENST00000577272 72 ntBASIC2.05□□□□□ -2.08
TNFSF4P23510 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.05□□□□□ -2.08
TNFSF4P23510 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TNFSF4P23510 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TNFSF4P23510 Y_RNA.26-201ENST00000362539 101 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 RNU6-414P-201ENST00000363705 104 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 Y_RNA.176-201ENST00000363815 109 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 Y_RNA.341-201ENST00000365341 102 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 MIR518C-201ENST00000384822 101 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TNFSF4P23510 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 RNA5SP511-201ENST00000410487 115 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 RN7SKP200-201ENST00000410564 320 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 RNA5SP508-201ENST00000411327 119 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFSF4P23510 RPS20P10-201ENST00000451209 253 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 AC098869.1-201ENST00000481627 292 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 AL358944.1-201ENST00000528537 144 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 AP002004.2-201ENST00000531656 154 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 AC015720.1-201ENST00000565251 277 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 MIR3145-201ENST00000580727 82 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 AL162424.1-201ENST00000602325 221 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 AC004832.4-201ENST00000608952 331 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TNFSF4P23510 MIR8054-201ENST00000620877 86 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 U6.104-201ENST00000637979 90 ntBASIC2.04□□□□□ -2.08
TNFSF4P23510 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
TNFSF4P23510 RNU4-80P-201ENST00000363200 141 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 RNU6-326P-201ENST00000365480 107 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.03□□□□□ -2.08
TNFSF4P23510 Y_RNA.418-201ENST00000384029 102 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 SNORD116-13-201ENST00000384408 92 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 Y_RNA.574-201ENST00000384766 95 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TNFSF4P23510 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms