Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 TOMM22P2-201ENST00000430735 237 ntBASIC1.99□□□□□ -2.09
NR1D1P20393 RPL23AP3-201ENST00000453844 468 ntBASIC1.99□□□□□ -2.09
NR1D1P20393 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.99□□□□□ -2.09
NR1D1P20393 MIR514B-201ENST00000516774 80 ntBASIC1.99□□□□□ -2.09
NR1D1P20393 RNU6-570P-201ENST00000517051 105 ntBASIC1.99□□□□□ -2.09
NR1D1P20393 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.99□□□□□ -2.09
NR1D1P20393 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.99□□□□□ -2.09
NR1D1P20393 MIR3684-201ENST00000579779 74 ntBASIC1.99□□□□□ -2.09
NR1D1P20393 MIR4753-201ENST00000585119 83 ntBASIC1.99□□□□□ -2.09
NR1D1P20393 AC008749.1-201ENST00000597650 306 ntBASIC1.99□□□□□ -2.09
NR1D1P20393 AP001282.2-201ENST00000616149 309 ntBASIC1.99□□□□□ -2.09
NR1D1P20393 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NR1D1P20393 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
NR1D1P20393 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NR1D1P20393 MIR335-201ENST00000362173 94 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 Y_RNA.14-201ENST00000362415 103 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNU6-727P-201ENST00000363592 107 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNU6-1305P-201ENST00000364353 104 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 Y_RNA.350-201ENST00000365409 98 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNU6-438P-201ENST00000365561 103 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 Y_RNA.415-201ENST00000384012 112 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNU6-20P-201ENST00000384106 107 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 Y_RNA.447-201ENST00000384184 113 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 Y_RNA.476-201ENST00000384347 108 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 MIR29C-201ENST00000385231 88 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNU2-20P-201ENST00000410425 191 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNA5SP504-201ENST00000410676 117 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNU2-38P-201ENST00000410856 79 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RAB28P5-201ENST00000427490 651 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 AL353689.1-201ENST00000438895 199 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 HMGN2P18-201ENST00000450680 270 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 AC016925.1-201ENST00000458303 298 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 snoU13.18-201ENST00000459483 104 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNU6-496P-201ENST00000516145 99 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 RNU2-34P-201ENST00000516534 121 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.98□□□□□ -2.09
NR1D1P20393 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 AC005176.2-201ENST00000596933 147 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 MIR3674-201ENST00000636576 68 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 AC008555.8-201ENST00000623602 2168 ntBASIC1.98□□□□□ -2.09
NR1D1P20393 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 SNORD113-8-201ENST00000363497 74 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 Y_RNA.570-201ENST00000384750 101 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 MIR1283-2-201ENST00000408621 87 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 SRIP3-201ENST00000413200 219 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 AC108059.2-201ENST00000434626 151 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 RPL39P38-201ENST00000467018 153 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 HMGN2P9-201ENST00000476875 229 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 SEPT14P8-201ENST00000508026 178 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 AC093259.1-201ENST00000509755 300 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
NR1D1P20393 RNU6-948P-201ENST00000516374 107 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 RNU1-117P-201ENST00000517041 158 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 RNA5SP490-201ENST00000517141 136 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 RNU6-794P-201ENST00000517261 64 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 MIR3122-201ENST00000577243 73 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.97□□□□□ -2.09
NR1D1P20393 AL109918.3-201ENST00000603072 338 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 SNORD113-5-201ENST00000607261 78 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 AC127459.3-201ENST00000624328 466 ntBASIC1.97□□□□□ -2.09
NR1D1P20393 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
NR1D1P20393 AC092881.1-201ENST00000638218 2733 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 RNU6-545P-201ENST00000362681 104 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 Y_RNA.116-201ENST00000363292 103 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 RNU6-379P-201ENST00000363813 104 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 SNORD87-201ENST00000364849 89 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 Y_RNA.332-201ENST00000365271 113 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 RNU6-975P-201ENST00000384296 105 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 SNORD14D-201ENST00000384390 87 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 Y_RNA.489-201ENST00000384410 101 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 RNU6-102P-201ENST00000384485 104 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 Y_RNA.541-201ENST00000384640 113 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 RNU2-2P-201ENST00000410396 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NR1D1P20393 AC123900.1-201ENST00000420390 96 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.96□□□□□ -2.1
NR1D1P20393 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.96□□□□□ -2.1
NR1D1P20393 AC245102.2-201ENST00000448956 180 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 HSPE1P25-201ENST00000455484 251 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 ATP5EP1-201ENST00000510257 156 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 MTND1P19-201ENST00000511780 315 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 Y_RNA.680-201ENST00000516441 93 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.96□□□□□ -2.1
NR1D1P20393 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.15-201ENST00000611544 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.16-201ENST00000613119 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.12-201ENST00000613778 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.20-201ENST00000613956 192 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.9-201ENST00000615427 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.11-201ENST00000616345 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.2-201ENST00000616535 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.3-201ENST00000617785 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.19-201ENST00000618602 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 RNU2-1-201ENST00000618664 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.6-201ENST00000619225 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.5-201ENST00000619465 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 U2.10-201ENST00000620268 191 ntBASIC1.96□□□□□ -2.1
NR1D1P20393 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NR1D1P20393 AL391987.6-201ENST00000305671 199 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms