Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR8070-201ENST00000616510 88 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 MIR3688-2-201ENST00000636963 87 ntBASIC1.07□□□□□ -2.24
HLA-DPA1P20036 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
HLA-DPA1P20036 RNA5SP361-201ENST00000362686 118 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.06□□□□□ -2.24
HLA-DPA1P20036 Y_RNA.557-201ENST00000384680 107 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 MTCYBP10-201ENST00000424905 650 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 AL137792.2-201ENST00000443484 235 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 RNU6-329P-201ENST00000459618 107 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 AC105313.1-201ENST00000509121 353 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 RNU6-1291P-201ENST00000516591 104 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 RNU6-1016P-201ENST00000516689 94 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DPA1P20036 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 U6.115-201ENST00000636045 103 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.06□□□□□ -2.24
HLA-DPA1P20036 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
HLA-DPA1P20036 RNY1P16-201ENST00000363063 111 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 Y_RNA.516-201ENST00000384541 124 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 Y_RNA.594-201ENST00000410373 140 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 AC002429.1-201ENST00000437672 148 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 AC233266.1-201ENST00000454518 96 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 AC092989.1-201ENST00000481235 277 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 RNA5SP102-201ENST00000516865 106 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 AC105029.1-201ENST00000520250 669 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 AC136932.1-201ENST00000574771 208 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 AC242852.1-201ENST00000612151 96 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 AC244015.1-201ENST00000622301 99 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 AC127459.3-201ENST00000624328 466 ntBASIC1.05□□□□□ -2.24
HLA-DPA1P20036 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.04□□□□□ -2.24
HLA-DPA1P20036 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DPA1P20036 SNORA25.9-201ENST00000365087 128 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 RNU6-510P-201ENST00000391239 108 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 RNU6-1050P-201ENST00000410388 107 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 RNA5SP475-201ENST00000410568 110 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DPA1P20036 AL589823.1-201ENST00000429577 183 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 AL353997.1-201ENST00000432936 108 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 AC104332.1-201ENST00000440471 797 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 RNU6-625P-201ENST00000459412 107 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 AL049830.1-201ENST00000468034 425 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.04□□□□□ -2.24
HLA-DPA1P20036 SNORD79.1-201ENST00000516069 84 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 AC022868.1-201ENST00000517767 391 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 AC018638.8-201ENST00000588755 281 ntBASIC1.04□□□□□ -2.24
HLA-DPA1P20036 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DPA1P20036 RNU6-874P-201ENST00000362390 105 ntBASIC1.03□□□□□ -2.24
HLA-DPA1P20036 Y_RNA.238-201ENST00000364441 102 ntBASIC1.03□□□□□ -2.24
HLA-DPA1P20036 RNU6-593P-201ENST00000364716 112 ntBASIC1.03□□□□□ -2.24
HLA-DPA1P20036 MIR873-201ENST00000401120 77 ntBASIC1.03□□□□□ -2.24
HLA-DPA1P20036 Y_RNA.670-201ENST00000516255 105 ntBASIC1.03□□□□□ -2.24
HLA-DPA1P20036 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DPA1P20036 AL117336.2-201ENST00000602435 335 ntBASIC1.03□□□□□ -2.24
HLA-DPA1P20036 MIR3674-201ENST00000636576 68 ntBASIC1.03□□□□□ -2.24
HLA-DPA1P20036 MIR410-201ENST00000362222 80 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 SNORD114-27-201ENST00000363766 70 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 Y_RNA.358-201ENST00000365491 99 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 SNORA80D-201ENST00000384488 135 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 RNU6-136P-201ENST00000384663 107 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 MIR520G-201ENST00000385064 90 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 MIR548F5-201ENST00000408421 86 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
HLA-DPA1P20036 RPS3AP52-201ENST00000435639 297 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
HLA-DPA1P20036 U8.22-201ENST00000459141 133 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 SNORD124-201ENST00000459577 104 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DPA1P20036 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.02□□□□□ -2.25
HLA-DPA1P20036 SCARNA16.2-201ENST00000516520 172 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 AP002001.1-203ENST00000534002 267 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DPA1P20036 AC090517.2-201ENST00000614966 680 ntBASIC1.02□□□□□ -2.25
HLA-DPA1P20036 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HLA-DPA1P20036 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.01□□□□□ -2.25
HLA-DPA1P20036 MIRLET7C-201ENST00000362160 84 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 Y_RNA.86-201ENST00000363020 111 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 Y_RNA.124-201ENST00000363339 93 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 Y_RNA.318-201ENST00000365131 97 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DPA1P20036 MIR548K-201ENST00000408406 116 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 MIR1276-201ENST00000408707 83 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 RNU5A-5P-201ENST00000411054 116 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.01□□□□□ -2.25
HLA-DPA1P20036 AC092423.1-201ENST00000430165 186 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 LINC01399-202ENST00000458450 244 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
HLA-DPA1P20036 Y_RNA.708-201ENST00000516950 96 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 AL020996.3-201ENST00000606617 222 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.01□□□□□ -2.25
HLA-DPA1P20036 RNU6-454P-201ENST00000364292 107 ntBASIC1□□□□□ -2.25
HLA-DPA1P20036 RNU4-41P-201ENST00000364426 143 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms