Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 RNU5A-5P-201ENST00000411054 116 ntBASIC1.96□□□□□ -2.1
CD58P19256 AC008134.1-201ENST00000420943 193 ntBASIC1.96□□□□□ -2.1
CD58P19256 MRPS10P1-201ENST00000448483 130 ntBASIC1.96□□□□□ -2.1
CD58P19256 AC011753.1-201ENST00000451001 220 ntBASIC1.96□□□□□ -2.1
CD58P19256 AC010409.1-201ENST00000487382 476 ntBASIC1.96□□□□□ -2.1
CD58P19256 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.96□□□□□ -2.1
CD58P19256 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.96□□□□□ -2.1
CD58P19256 MIR5094-201ENST00000578766 85 ntBASIC1.96□□□□□ -2.1
CD58P19256 DEFB117-201ENST00000602356 141 ntBASIC1.96□□□□□ -2.1
CD58P19256 AC006380.1-201ENST00000603598 186 ntBASIC1.96□□□□□ -2.1
CD58P19256 SDR42E1P4-201ENST00000620894 481 ntBASIC1.96□□□□□ -2.1
CD58P19256 MIR338-201ENST00000636369 67 ntBASIC1.96□□□□□ -2.1
CD58P19256 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CD58P19256 Y_RNA.47-201ENST00000362697 108 ntBASIC1.95□□□□□ -2.1
CD58P19256 snoU2-30.2-201ENST00000362805 70 ntBASIC1.95□□□□□ -2.1
CD58P19256 RNA5SP99-201ENST00000364020 114 ntBASIC1.95□□□□□ -2.1
CD58P19256 Y_RNA.230-201ENST00000364348 109 ntBASIC1.95□□□□□ -2.1
CD58P19256 Y_RNA.329-201ENST00000365209 107 ntBASIC1.95□□□□□ -2.1
CD58P19256 Y_RNA.462-201ENST00000384268 102 ntBASIC1.95□□□□□ -2.1
CD58P19256 Y_RNA.541-201ENST00000384640 113 ntBASIC1.95□□□□□ -2.1
CD58P19256 RNU6-713P-201ENST00000384761 107 ntBASIC1.95□□□□□ -2.1
CD58P19256 MIR568-201ENST00000385036 95 ntBASIC1.95□□□□□ -2.1
CD58P19256 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
CD58P19256 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.95□□□□□ -2.1
CD58P19256 AL031003.1-201ENST00000404229 172 ntBASIC1.95□□□□□ -2.1
CD58P19256 RNU6-1186P-201ENST00000410429 97 ntBASIC1.95□□□□□ -2.1
CD58P19256 RNA5SP501-201ENST00000410990 112 ntBASIC1.95□□□□□ -2.1
CD58P19256 AL731563.1-201ENST00000442202 214 ntBASIC1.95□□□□□ -2.1
CD58P19256 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.95□□□□□ -2.1
CD58P19256 AC005042.3-201ENST00000453230 174 ntBASIC1.95□□□□□ -2.1
CD58P19256 HSPE1P25-201ENST00000455484 251 ntBASIC1.95□□□□□ -2.1
CD58P19256 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
CD58P19256 AC055731.1-201ENST00000474387 401 ntBASIC1.95□□□□□ -2.1
CD58P19256 RPS27P22-201ENST00000478056 241 ntBASIC1.95□□□□□ -2.1
CD58P19256 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
CD58P19256 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.95□□□□□ -2.1
CD58P19256 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.95□□□□□ -2.1
CD58P19256 AC009127.3-201ENST00000570531 403 ntBASIC1.95□□□□□ -2.1
CD58P19256 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
CD58P19256 MIR6895-201ENST00000613497 78 ntBASIC1.95□□□□□ -2.1
CD58P19256 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.95□□□□□ -2.1
CD58P19256 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CD58P19256 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.94□□□□□ -2.1
CD58P19256 Y_RNA.133-201ENST00000363428 110 ntBASIC1.94□□□□□ -2.1
CD58P19256 RNU1-96P-201ENST00000364163 162 ntBASIC1.94□□□□□ -2.1
CD58P19256 Y_RNA.243-201ENST00000364481 109 ntBASIC1.94□□□□□ -2.1
CD58P19256 SNORD63-201ENST00000384262 68 ntBASIC1.94□□□□□ -2.1
CD58P19256 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
CD58P19256 AL117342.1-201ENST00000404861 406 ntBASIC1.94□□□□□ -2.1
CD58P19256 AC025465.3-201ENST00000510570 311 ntBASIC1.94□□□□□ -2.1
CD58P19256 RNU6-496P-201ENST00000516145 99 ntBASIC1.94□□□□□ -2.1
CD58P19256 RNU6-436P-201ENST00000516171 114 ntBASIC1.94□□□□□ -2.1
CD58P19256 RNU6-63P-201ENST00000516690 95 ntBASIC1.94□□□□□ -2.1
CD58P19256 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.94□□□□□ -2.1
CD58P19256 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.94□□□□□ -2.1
CD58P19256 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.94□□□□□ -2.1
CD58P19256 AC008749.1-201ENST00000597650 306 ntBASIC1.94□□□□□ -2.1
CD58P19256 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
CD58P19256 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CD58P19256 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CD58P19256 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CD58P19256 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CD58P19256 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
CD58P19256 AC010615.1-201ENST00000594254 1764 ntBASIC1.93□□□□□ -2.1
CD58P19256 Y_RNA.176-201ENST00000363815 109 ntBASIC1.93□□□□□ -2.1
CD58P19256 Y_RNA.276-201ENST00000364732 109 ntBASIC1.93□□□□□ -2.1
CD58P19256 Y_RNA.396-201ENST00000383949 103 ntBASIC1.93□□□□□ -2.1
CD58P19256 Y_RNA.483-201ENST00000384380 101 ntBASIC1.93□□□□□ -2.1
CD58P19256 RNU6-136P-201ENST00000384663 107 ntBASIC1.93□□□□□ -2.1
CD58P19256 MT-TW-201ENST00000387382 68 ntBASIC1.93□□□□□ -2.1
CD58P19256 snosnR66.1-201ENST00000391095 99 ntBASIC1.93□□□□□ -2.1
CD58P19256 AC096920.1-201ENST00000423991 241 ntBASIC1.93□□□□□ -2.1
CD58P19256 MTND3P2-201ENST00000438452 342 ntBASIC1.93□□□□□ -2.1
CD58P19256 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
CD58P19256 RNU6-548P-201ENST00000517083 115 ntBASIC1.93□□□□□ -2.1
CD58P19256 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
CD58P19256 MIR4529-201ENST00000578110 78 ntBASIC1.93□□□□□ -2.1
CD58P19256 MIR4438-201ENST00000585271 93 ntBASIC1.93□□□□□ -2.1
CD58P19256 AC005034.5-201ENST00000604219 466 ntBASIC1.93□□□□□ -2.1
CD58P19256 AL162730.1-201ENST00000605734 292 ntBASIC1.93□□□□□ -2.1
CD58P19256 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.93□□□□□ -2.1
CD58P19256 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.93□□□□□ -2.1
CD58P19256 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CD58P19256 SNORA27.1-201ENST00000362604 124 ntBASIC1.92□□□□□ -2.1
CD58P19256 Y_RNA.84-201ENST00000363011 104 ntBASIC1.92□□□□□ -2.1
CD58P19256 Y_RNA.172-201ENST00000363765 102 ntBASIC1.92□□□□□ -2.1
CD58P19256 Y_RNA.376-201ENST00000365638 108 ntBASIC1.92□□□□□ -2.1
CD58P19256 Y_RNA.383-201ENST00000383855 97 ntBASIC1.92□□□□□ -2.1
CD58P19256 RNU6-505P-201ENST00000384427 107 ntBASIC1.92□□□□□ -2.1
CD58P19256 RNA5SP465-201ENST00000391195 109 ntBASIC1.92□□□□□ -2.1
CD58P19256 RPL23AP36-201ENST00000413895 458 ntBASIC1.92□□□□□ -2.1
CD58P19256 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.92□□□□□ -2.1
CD58P19256 POLR2KP2-201ENST00000438155 177 ntBASIC1.92□□□□□ -2.1
CD58P19256 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
CD58P19256 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.92□□□□□ -2.1
CD58P19256 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.92□□□□□ -2.1
CD58P19256 AC010598.1-201ENST00000510378 103 ntBASIC1.92□□□□□ -2.1
CD58P19256 RNA5SP20-201ENST00000515976 84 ntBASIC1.92□□□□□ -2.1
CD58P19256 SCARNA24.2-201ENST00000516968 130 ntBASIC1.92□□□□□ -2.1
CD58P19256 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms