Protein–RNA interactions for Protein: P13727

PRG2, Bone marrow proteoglycan, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG2P13727 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
PRG2P13727 RNU6-227P-201ENST00000362865 103 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNU6-1285P-201ENST00000363480 105 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNU6-105P-201ENST00000363909 104 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNU6-704P-201ENST00000364162 103 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNU6-818P-201ENST00000364837 108 ntBASIC1.74□□□□□ -2.13
PRG2P13727 Y_RNA.292-201ENST00000364904 97 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNU6-290P-201ENST00000365212 101 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNY1P5-201ENST00000383890 115 ntBASIC1.74□□□□□ -2.13
PRG2P13727 Y_RNA.418-201ENST00000384029 102 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNU6-17P-201ENST00000384245 107 ntBASIC1.74□□□□□ -2.13
PRG2P13727 SNORD63-201ENST00000384262 68 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNU6-18P-201ENST00000384527 107 ntBASIC1.74□□□□□ -2.13
PRG2P13727 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PRG2P13727 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PRG2P13727 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.74□□□□□ -2.13
PRG2P13727 MIR1261-201ENST00000408659 82 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RNU4-30P-201ENST00000410245 143 ntBASIC1.74□□□□□ -2.13
PRG2P13727 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PRG2P13727 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PRG2P13727 AC005002.2-201ENST00000438228 269 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RN7SKP210-201ENST00000459176 261 ntBASIC1.74□□□□□ -2.13
PRG2P13727 RPL23AP75-201ENST00000491601 451 ntBASIC1.74□□□□□ -2.13
PRG2P13727 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.74□□□□□ -2.13
PRG2P13727 AC074133.1-201ENST00000515696 183 ntBASIC1.74□□□□□ -2.13
PRG2P13727 MRPS18CP4-201ENST00000535821 231 ntBASIC1.74□□□□□ -2.13
PRG2P13727 AC055872.1-201ENST00000570978 278 ntBASIC1.74□□□□□ -2.13
PRG2P13727 AC090617.3-201ENST00000573670 475 ntBASIC1.74□□□□□ -2.13
PRG2P13727 MIR4308-201ENST00000580634 81 ntBASIC1.74□□□□□ -2.13
PRG2P13727 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
PRG2P13727 AC104984.5-201ENST00000586878 94 ntBASIC1.74□□□□□ -2.13
PRG2P13727 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.74□□□□□ -2.13
PRG2P13727 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.74□□□□□ -2.13
PRG2P13727 MIR6715A-201ENST00000615929 79 ntBASIC1.74□□□□□ -2.13
PRG2P13727 AC097372.5-201ENST00000623665 376 ntBASIC1.74□□□□□ -2.13
PRG2P13727 SNORA43.4-201ENST00000629559 138 ntBASIC1.74□□□□□ -2.13
PRG2P13727 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.73□□□□□ -2.13
PRG2P13727 AC233981.2-201ENST00000611524 1614 ntBASIC1.73□□□□□ -2.13
PRG2P13727 RNU6-961P-201ENST00000363893 105 ntBASIC1.73□□□□□ -2.13
PRG2P13727 Y_RNA.398-201ENST00000383952 99 ntBASIC1.73□□□□□ -2.13
PRG2P13727 RNU6-378P-201ENST00000384324 107 ntBASIC1.73□□□□□ -2.13
PRG2P13727 AL357139.1-201ENST00000407792 426 ntBASIC1.73□□□□□ -2.13
PRG2P13727 RNU5E-9P-201ENST00000411164 104 ntBASIC1.73□□□□□ -2.13
PRG2P13727 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.73□□□□□ -2.13
PRG2P13727 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.73□□□□□ -2.13
PRG2P13727 TMSB4XP3-201ENST00000445144 114 ntBASIC1.73□□□□□ -2.13
PRG2P13727 AC009237.7-201ENST00000447357 229 ntBASIC1.73□□□□□ -2.13
PRG2P13727 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.73□□□□□ -2.13
PRG2P13727 RNU7-87P-201ENST00000459343 62 ntBASIC1.73□□□□□ -2.13
PRG2P13727 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.73□□□□□ -2.13
PRG2P13727 AK3P2-201ENST00000507976 429 ntBASIC1.73□□□□□ -2.13
PRG2P13727 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.73□□□□□ -2.13
PRG2P13727 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.73□□□□□ -2.13
PRG2P13727 MIR3144-201ENST00000579460 79 ntBASIC1.73□□□□□ -2.13
PRG2P13727 MZT1P2-201ENST00000604387 248 ntBASIC1.73□□□□□ -2.13
PRG2P13727 AL034555.1-201ENST00000604816 211 ntBASIC1.73□□□□□ -2.13
PRG2P13727 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.73□□□□□ -2.13
PRG2P13727 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRG2P13727 Y_RNA.44-201ENST00000362676 108 ntBASIC1.72□□□□□ -2.13
PRG2P13727 RNA5SP493-201ENST00000364115 91 ntBASIC1.72□□□□□ -2.13
PRG2P13727 SNORD32B-201ENST00000364460 84 ntBASIC1.72□□□□□ -2.13
PRG2P13727 Y_RNA.240-201ENST00000364469 95 ntBASIC1.72□□□□□ -2.13
PRG2P13727 Y_RNA.275-201ENST00000364726 110 ntBASIC1.72□□□□□ -2.13
PRG2P13727 RNU6-926P-201ENST00000384075 107 ntBASIC1.72□□□□□ -2.13
PRG2P13727 U8.10-201ENST00000384260 133 ntBASIC1.72□□□□□ -2.13
PRG2P13727 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
PRG2P13727 RNA5SP100-201ENST00000410903 110 ntBASIC1.72□□□□□ -2.13
PRG2P13727 RNA5SP59-201ENST00000410922 110 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.72□□□□□ -2.13
PRG2P13727 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AC243964.1-201ENST00000441814 261 ntBASIC1.72□□□□□ -2.13
PRG2P13727 HMGN2P23-201ENST00000456759 269 ntBASIC1.72□□□□□ -2.13
PRG2P13727 SNORD2.1-201ENST00000458762 69 ntBASIC1.72□□□□□ -2.13
PRG2P13727 U8.21-201ENST00000459536 136 ntBASIC1.72□□□□□ -2.13
PRG2P13727 COX6CP14-201ENST00000469580 174 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AP000870.1-201ENST00000472927 406 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.72□□□□□ -2.13
PRG2P13727 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.72□□□□□ -2.13
PRG2P13727 RNU6-1219P-201ENST00000516143 112 ntBASIC1.72□□□□□ -2.13
PRG2P13727 RNVU1-2-201ENST00000516326 135 ntBASIC1.72□□□□□ -2.13
PRG2P13727 SNORA25.14-201ENST00000516481 132 ntBASIC1.72□□□□□ -2.13
PRG2P13727 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AC109479.2-201ENST00000517842 174 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.72□□□□□ -2.13
PRG2P13727 RPL21P9-201ENST00000556149 474 ntBASIC1.72□□□□□ -2.13
PRG2P13727 MIR3169-201ENST00000578032 83 ntBASIC1.72□□□□□ -2.13
PRG2P13727 MIR4648-201ENST00000580107 72 ntBASIC1.72□□□□□ -2.13
PRG2P13727 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AL357075.2-201ENST00000614906 189 ntBASIC1.72□□□□□ -2.13
PRG2P13727 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.72□□□□□ -2.13
PRG2P13727 U6.106-201ENST00000636360 105 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AC241585.2-209ENST00000638217 143 ntBASIC1.72□□□□□ -2.13
PRG2P13727 AC068700.1-201ENST00000565862 3754 ntBASIC1.72□□□□□ -2.13
PRG2P13727 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.71□□□□□ -2.13
PRG2P13727 Y_RNA.82-201ENST00000363000 102 ntBASIC1.71□□□□□ -2.14
PRG2P13727 RNU5B-2P-201ENST00000363036 113 ntBASIC1.71□□□□□ -2.14
PRG2P13727 Y_RNA.92-201ENST00000363043 102 ntBASIC1.71□□□□□ -2.14
PRG2P13727 Y_RNA.235-201ENST00000364412 102 ntBASIC1.71□□□□□ -2.14
PRG2P13727 SNORD32A-201ENST00000364805 84 ntBASIC1.71□□□□□ -2.14
PRG2P13727 Y_RNA.306-201ENST00000365015 102 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms