Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.38□□□□□ -1.87
BMP3P12645 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.38□□□□□ -1.87
BMP3P12645 RNU7-14P-201ENST00000459331 62 ntBASIC3.38□□□□□ -1.87
BMP3P12645 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
BMP3P12645 RPL36AP48-201ENST00000485521 314 ntBASIC3.38□□□□□ -1.87
BMP3P12645 GTF3AP2-201ENST00000557014 266 ntBASIC3.38□□□□□ -1.87
BMP3P12645 ELOCP29-201ENST00000588193 334 ntBASIC3.38□□□□□ -1.87
BMP3P12645 AL136360.1-201ENST00000503377 1900 ntBASIC3.37□□□□□ -1.87
BMP3P12645 MIR181A2-201ENST00000384863 110 ntBASIC3.37□□□□□ -1.87
BMP3P12645 MIR624-201ENST00000385217 97 ntBASIC3.37□□□□□ -1.87
BMP3P12645 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.37□□□□□ -1.87
BMP3P12645 SNORD11-201ENST00000459124 84 ntBASIC3.37□□□□□ -1.87
BMP3P12645 RPL30P14-201ENST00000482744 348 ntBASIC3.37□□□□□ -1.87
BMP3P12645 RN7SL633P-201ENST00000488974 297 ntBASIC3.37□□□□□ -1.87
BMP3P12645 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.37□□□□□ -1.87
BMP3P12645 AP000867.2-201ENST00000532468 320 ntBASIC3.37□□□□□ -1.87
BMP3P12645 RPL23AP91-201ENST00000569211 455 ntBASIC3.37□□□□□ -1.87
BMP3P12645 AC105245.1-201ENST00000581934 244 ntBASIC3.37□□□□□ -1.87
BMP3P12645 MIR4753-201ENST00000585119 83 ntBASIC3.37□□□□□ -1.87
BMP3P12645 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BMP3P12645 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
BMP3P12645 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
BMP3P12645 MIR148B-201ENST00000362252 99 ntBASIC3.36□□□□□ -1.87
BMP3P12645 RNU4-13P-201ENST00000364019 141 ntBASIC3.36□□□□□ -1.87
BMP3P12645 Y_RNA.203-201ENST00000364106 102 ntBASIC3.36□□□□□ -1.87
BMP3P12645 U8.6-201ENST00000364939 135 ntBASIC3.36□□□□□ -1.87
BMP3P12645 Y_RNA.348-201ENST00000365403 103 ntBASIC3.36□□□□□ -1.87
BMP3P12645 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BMP3P12645 AC105272.1-201ENST00000438604 198 ntBASIC3.36□□□□□ -1.87
BMP3P12645 AC016717.1-201ENST00000448918 286 ntBASIC3.36□□□□□ -1.87
BMP3P12645 AC245102.2-201ENST00000448956 180 ntBASIC3.36□□□□□ -1.87
BMP3P12645 RNA5SP356-201ENST00000515972 94 ntBASIC3.36□□□□□ -1.87
BMP3P12645 MIR449C-201ENST00000516047 92 ntBASIC3.36□□□□□ -1.87
BMP3P12645 RNU2-58P-201ENST00000516403 183 ntBASIC3.36□□□□□ -1.87
BMP3P12645 SNORA18.4-201ENST00000516440 124 ntBASIC3.36□□□□□ -1.87
BMP3P12645 RNU1-104P-201ENST00000517280 175 ntBASIC3.36□□□□□ -1.87
BMP3P12645 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.36□□□□□ -1.87
BMP3P12645 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
BMP3P12645 RNU6-640P-201ENST00000363693 105 ntBASIC3.35□□□□□ -1.87
BMP3P12645 SNORA46-201ENST00000384762 135 ntBASIC3.35□□□□□ -1.87
BMP3P12645 RNA5SP127-201ENST00000411051 133 ntBASIC3.35□□□□□ -1.87
BMP3P12645 RNU6-57P-201ENST00000411348 103 ntBASIC3.35□□□□□ -1.87
BMP3P12645 AL021397.1-201ENST00000451806 248 ntBASIC3.35□□□□□ -1.87
BMP3P12645 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.35□□□□□ -1.87
BMP3P12645 AC080013.2-201ENST00000460866 323 ntBASIC3.35□□□□□ -1.87
BMP3P12645 RN7SKP132-201ENST00000516001 208 ntBASIC3.35□□□□□ -1.87
BMP3P12645 RNU6-412P-201ENST00000516434 106 ntBASIC3.35□□□□□ -1.87
BMP3P12645 AC068657.1-201ENST00000520807 306 ntBASIC3.35□□□□□ -1.87
BMP3P12645 MIR2681-201ENST00000581814 105 ntBASIC3.35□□□□□ -1.87
BMP3P12645 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.35□□□□□ -1.87
BMP3P12645 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.35□□□□□ -1.87
BMP3P12645 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BMP3P12645 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
BMP3P12645 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
BMP3P12645 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BMP3P12645 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
BMP3P12645 Y_RNA.796-201ENST00000364268 102 ntBASIC3.34□□□□□ -1.87
BMP3P12645 RNU6-1107P-201ENST00000364817 104 ntBASIC3.34□□□□□ -1.87
BMP3P12645 Y_RNA.799-201ENST00000364992 102 ntBASIC3.34□□□□□ -1.87
BMP3P12645 SNORA26-201ENST00000391286 122 ntBASIC3.34□□□□□ -1.87
BMP3P12645 EIF4EP4-201ENST00000424916 578 ntBASIC3.34□□□□□ -1.87
BMP3P12645 AC023449.1-201ENST00000454464 154 ntBASIC3.34□□□□□ -1.87
BMP3P12645 RNU7-170P-201ENST00000459303 61 ntBASIC3.34□□□□□ -1.87
BMP3P12645 AC007751.1-201ENST00000529260 376 ntBASIC3.34□□□□□ -1.87
BMP3P12645 MIR3124-201ENST00000582636 67 ntBASIC3.34□□□□□ -1.87
BMP3P12645 AL365205.2-201ENST00000594586 68 ntBASIC3.34□□□□□ -1.87
BMP3P12645 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.34□□□□□ -1.87
BMP3P12645 uc_338.14-201ENST00000613162 166 ntBASIC3.34□□□□□ -1.87
BMP3P12645 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.34□□□□□ -1.87
BMP3P12645 AC002076.2-201ENST00000617362 122 ntBASIC3.34□□□□□ -1.87
BMP3P12645 AC006435.5-201ENST00000624486 112 ntBASIC3.34□□□□□ -1.87
BMP3P12645 AC009487.2-201ENST00000420969 6821 ntBASIC3.34□□□□□ -1.88
BMP3P12645 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
BMP3P12645 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
BMP3P12645 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
BMP3P12645 RNU6-1209P-201ENST00000363655 107 ntBASIC3.33□□□□□ -1.88
BMP3P12645 RNU6-1138P-201ENST00000365359 106 ntBASIC3.33□□□□□ -1.88
BMP3P12645 Y_RNA.486-201ENST00000384398 107 ntBASIC3.33□□□□□ -1.88
BMP3P12645 MIR562-201ENST00000384894 95 ntBASIC3.33□□□□□ -1.88
BMP3P12645 MIR29B2-201ENST00000385055 81 ntBASIC3.33□□□□□ -1.88
BMP3P12645 SNORA12.1-201ENST00000390873 148 ntBASIC3.33□□□□□ -1.88
BMP3P12645 MIR1263-201ENST00000408324 86 ntBASIC3.33□□□□□ -1.88
BMP3P12645 AC087499.2-201ENST00000432861 149 ntBASIC3.33□□□□□ -1.88
BMP3P12645 AF228730.3-201ENST00000436691 102 ntBASIC3.33□□□□□ -1.88
BMP3P12645 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.33□□□□□ -1.88
BMP3P12645 RN7SL429P-201ENST00000479090 223 ntBASIC3.33□□□□□ -1.88
BMP3P12645 RN7SL489P-201ENST00000486185 223 ntBASIC3.33□□□□□ -1.88
BMP3P12645 RN7SL327P-201ENST00000488659 223 ntBASIC3.33□□□□□ -1.88
BMP3P12645 ATP5EP1-201ENST00000510257 156 ntBASIC3.33□□□□□ -1.88
BMP3P12645 AC025647.1-201ENST00000517879 253 ntBASIC3.33□□□□□ -1.88
BMP3P12645 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.33□□□□□ -1.88
BMP3P12645 AC008739.2-201ENST00000597006 317 ntBASIC3.33□□□□□ -1.88
BMP3P12645 Pinc.1-201ENST00000616452 154 ntBASIC3.33□□□□□ -1.88
BMP3P12645 RN7SL853P-201ENST00000617250 223 ntBASIC3.33□□□□□ -1.88
BMP3P12645 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
BMP3P12645 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BMP3P12645 RNU6-766P-201ENST00000362478 107 ntBASIC3.32□□□□□ -1.88
BMP3P12645 Y_RNA.66-201ENST00000362862 102 ntBASIC3.32□□□□□ -1.88
BMP3P12645 SNORD72-201ENST00000390994 80 ntBASIC3.32□□□□□ -1.88
BMP3P12645 RNA5SP354-201ENST00000391247 136 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms