Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 U2.20-201ENST00000613956 192 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 AL449363.1-201ENST00000617815 186 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 MTND1P7-201ENST00000632801 297 ntBASIC2.82□□□□□ -1.96
COL6A2P12110 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.82□□□□□ -1.96
COL6A2P12110 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL6A2P12110 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL6A2P12110 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.81□□□□□ -1.96
COL6A2P12110 Y_RNA.8-201ENST00000362353 102 ntBASIC2.81□□□□□ -1.96
COL6A2P12110 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
COL6A2P12110 RNU6-674P-201ENST00000363831 107 ntBASIC2.81□□□□□ -1.96
COL6A2P12110 SUMO1P4-201ENST00000429430 302 ntBASIC2.81□□□□□ -1.96
COL6A2P12110 AL162725.1-201ENST00000435405 301 ntBASIC2.81□□□□□ -1.96
COL6A2P12110 SEPT7P4-201ENST00000437076 306 ntBASIC2.81□□□□□ -1.96
COL6A2P12110 UBE2DNL-203ENST00000474922 222 ntBASIC2.81□□□□□ -1.96
COL6A2P12110 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.81□□□□□ -1.96
COL6A2P12110 AL162274.2-201ENST00000614406 332 ntBASIC2.81□□□□□ -1.96
COL6A2P12110 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL6A2P12110 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
COL6A2P12110 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
COL6A2P12110 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
COL6A2P12110 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL6A2P12110 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 RNU1-22P-201ENST00000363334 158 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 RNU6-449P-201ENST00000383914 107 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 MIR592-201ENST00000384959 97 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 RNU6-239P-201ENST00000390990 99 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 RNU6-1228P-201ENST00000391014 107 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 RNA5SP511-201ENST00000410487 115 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 SRIP3-201ENST00000413200 219 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.8□□□□□ -1.96
COL6A2P12110 RPS27P22-201ENST00000478056 241 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 RN7SL297P-201ENST00000483161 293 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.8□□□□□ -1.96
COL6A2P12110 RNU6-991P-201ENST00000516168 107 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 RNU6-453P-201ENST00000516819 85 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 RNU6-667P-201ENST00000517186 102 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 AC027419.1-201ENST00000522976 328 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 AC015720.1-201ENST00000565251 277 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 MIR4325-201ENST00000583049 90 ntBASIC2.8□□□□□ -1.96
COL6A2P12110 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
COL6A2P12110 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.8□□□□□ -1.96
COL6A2P12110 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.79□□□□□ -1.96
COL6A2P12110 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
COL6A2P12110 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL6A2P12110 MIR367-201ENST00000362299 68 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 SNORA25.6-201ENST00000364121 118 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 RNU6-704P-201ENST00000364162 103 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 Y_RNA.229-201ENST00000364347 113 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 RNA5SP125-201ENST00000364843 120 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 RNY3P5-201ENST00000384127 102 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 AL445687.1-201ENST00000439946 251 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 TMSB4XP3-201ENST00000445144 114 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.79□□□□□ -1.96
COL6A2P12110 AC003982.1-202ENST00000469928 248 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.79□□□□□ -1.96
COL6A2P12110 RNU6-346P-201ENST00000516288 111 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.79□□□□□ -1.96
COL6A2P12110 AC109810.1-201ENST00000534066 224 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 NDUFA5P6-201ENST00000542110 379 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 U4atac.1-201ENST00000618345 95 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 U2.22-201ENST00000636441 106 ntBASIC2.79□□□□□ -1.96
COL6A2P12110 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
COL6A2P12110 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.79□□□□□ -1.96
COL6A2P12110 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL6A2P12110 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
COL6A2P12110 SNORD113-1-201ENST00000365321 69 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 RNU6-1130P-201ENST00000365434 107 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 SNORA25B-201ENST00000365507 128 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 Y_RNA.510-201ENST00000384511 114 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 MIR1278-201ENST00000408753 81 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 AC097462.1-201ENST00000514125 324 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 RNA5SP341-201ENST00000516261 117 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 RNU6-63P-201ENST00000516690 95 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 AC090616.3-201ENST00000582184 217 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 MIR4438-201ENST00000585271 93 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 RPL12P50-201ENST00000603116 116 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 U6.73-201ENST00000619194 103 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 AC012640.5-201ENST00000623897 319 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 AC132825.6-201ENST00000638861 357 ntBASIC2.78□□□□□ -1.96
COL6A2P12110 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL6A2P12110 RNU1-96P-201ENST00000364163 162 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 Y_RNA.400-201ENST00000383963 111 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 SNORA72-201ENST00000384339 132 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 RNU6-376P-201ENST00000384731 106 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 RNA5SP496-201ENST00000391240 109 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 AC060773.1-201ENST00000421698 310 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 AL353689.1-201ENST00000438895 199 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
COL6A2P12110 RNU6-437P-201ENST00000459408 95 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 AC010409.1-201ENST00000487382 476 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 SCGB1D5P-201ENST00000515134 247 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 RNU6-1146P-201ENST00000516282 102 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 RNU6-826P-201ENST00000516827 104 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 AC004486.1-201ENST00000546846 233 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 ZNF861P-201ENST00000588126 639 ntBASIC2.77□□□□□ -1.97
COL6A2P12110 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL6A2P12110 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.76□□□□□ -1.97
COL6A2P12110 SNORD116-18-201ENST00000383961 92 ntBASIC2.76□□□□□ -1.97
COL6A2P12110 RNU6-383P-201ENST00000410864 94 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms