Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RARAP10276 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RARAP10276 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RARAP10276 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RARAP10276 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
RARAP10276 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RARAP10276 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RARAP10276 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
RARAP10276 MIR449B-201ENST00000384995 97 ntBASIC3.44□□□□□ -1.86
RARAP10276 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.44□□□□□ -1.86
RARAP10276 RN7SL807P-201ENST00000470923 297 ntBASIC3.44□□□□□ -1.86
RARAP10276 RNU6-365P-201ENST00000517113 106 ntBASIC3.44□□□□□ -1.86
RARAP10276 PRELID2P1-201ENST00000552837 301 ntBASIC3.44□□□□□ -1.86
RARAP10276 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.44□□□□□ -1.86
RARAP10276 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.44□□□□□ -1.86
RARAP10276 AC012314.7-201ENST00000619693 93 ntBASIC3.44□□□□□ -1.86
RARAP10276 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RARAP10276 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.44□□□□□ -1.86
RARAP10276 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RARAP10276 RNA5SP50-201ENST00000363731 107 ntBASIC3.43□□□□□ -1.86
RARAP10276 RNU6-1328P-201ENST00000410938 106 ntBASIC3.43□□□□□ -1.86
RARAP10276 AL513477.1-202ENST00000417061 214 ntBASIC3.43□□□□□ -1.86
RARAP10276 CST9LP2-201ENST00000437612 320 ntBASIC3.43□□□□□ -1.86
RARAP10276 RPS12P18-201ENST00000442381 270 ntBASIC3.43□□□□□ -1.86
RARAP10276 AC115115.1-201ENST00000449927 248 ntBASIC3.43□□□□□ -1.86
RARAP10276 RNU6-1096P-201ENST00000517089 102 ntBASIC3.43□□□□□ -1.86
RARAP10276 RNU6-711P-201ENST00000517255 106 ntBASIC3.43□□□□□ -1.86
RARAP10276 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.43□□□□□ -1.86
RARAP10276 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.43□□□□□ -1.86
RARAP10276 MIR4474-201ENST00000579189 78 ntBASIC3.43□□□□□ -1.86
RARAP10276 AC006254.2-201ENST00000603259 279 ntBASIC3.43□□□□□ -1.86
RARAP10276 U6.73-201ENST00000619194 103 ntBASIC3.43□□□□□ -1.86
RARAP10276 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RARAP10276 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.43□□□□□ -1.86
RARAP10276 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RARAP10276 MTND5P18-201ENST00000445624 1801 ntBASIC3.42□□□□□ -1.86
RARAP10276 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RARAP10276 RPL21P3-201ENST00000395517 478 ntBASIC3.42□□□□□ -1.86
RARAP10276 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.42□□□□□ -1.86
RARAP10276 MICF-203ENST00000432679 129 ntBASIC3.42□□□□□ -1.86
RARAP10276 MTATP6P21-201ENST00000440681 189 ntBASIC3.42□□□□□ -1.86
RARAP10276 AP001486.1-201ENST00000463339 476 ntBASIC3.42□□□□□ -1.86
RARAP10276 RN7SL293P-201ENST00000481765 281 ntBASIC3.42□□□□□ -1.86
RARAP10276 IGKV1-22-201ENST00000524313 326 ntBASIC3.42□□□□□ -1.86
RARAP10276 MIR4276-201ENST00000584832 70 ntBASIC3.42□□□□□ -1.86
RARAP10276 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RARAP10276 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RARAP10276 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RARAP10276 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.41□□□□□ -1.86
RARAP10276 AC080128.1-201ENST00000474389 1917 ntBASIC3.41□□□□□ -1.86
RARAP10276 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.41□□□□□ -1.86
RARAP10276 RNU6-546P-201ENST00000383991 107 ntBASIC3.41□□□□□ -1.86
RARAP10276 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
RARAP10276 RNU2-32P-201ENST00000411193 191 ntBASIC3.41□□□□□ -1.86
RARAP10276 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.41□□□□□ -1.86
RARAP10276 AF228730.3-201ENST00000436691 102 ntBASIC3.41□□□□□ -1.86
RARAP10276 AC018634.1-201ENST00000437554 401 ntBASIC3.41□□□□□ -1.86
RARAP10276 AL021397.1-201ENST00000451806 248 ntBASIC3.41□□□□□ -1.86
RARAP10276 NDUFA4P2-201ENST00000489989 244 ntBASIC3.41□□□□□ -1.86
RARAP10276 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.41□□□□□ -1.86
RARAP10276 Y_RNA.694-201ENST00000516677 117 ntBASIC3.41□□□□□ -1.86
RARAP10276 RNU6-856P-201ENST00000516959 98 ntBASIC3.41□□□□□ -1.86
RARAP10276 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
RARAP10276 MIR3129-201ENST00000581095 76 ntBASIC3.41□□□□□ -1.86
RARAP10276 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.41□□□□□ -1.86
RARAP10276 U2.20-201ENST00000613956 192 ntBASIC3.41□□□□□ -1.86
RARAP10276 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.41□□□□□ -1.86
RARAP10276 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RARAP10276 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RARAP10276 AC093831.2-201ENST00000624393 3427 ntBASIC3.4□□□□□ -1.86
RARAP10276 MAPK10-322ENST00000641485 4530 ntBASIC3.4□□□□□ -1.86
RARAP10276 MIR450A1-201ENST00000362262 91 ntBASIC3.4□□□□□ -1.87
RARAP10276 Y_RNA.116-201ENST00000363292 103 ntBASIC3.4□□□□□ -1.87
RARAP10276 RNU1-33P-201ENST00000364249 162 ntBASIC3.4□□□□□ -1.87
RARAP10276 RNU6-32P-201ENST00000383948 107 ntBASIC3.4□□□□□ -1.87
RARAP10276 SNORA1-201ENST00000384107 130 ntBASIC3.4□□□□□ -1.87
RARAP10276 RNU6-13P-201ENST00000384248 107 ntBASIC3.4□□□□□ -1.87
RARAP10276 Y_RNA.495-201ENST00000384435 112 ntBASIC3.4□□□□□ -1.87
RARAP10276 RNU6-12P-201ENST00000384604 107 ntBASIC3.4□□□□□ -1.87
RARAP10276 RNU6-41P-201ENST00000384741 107 ntBASIC3.4□□□□□ -1.87
RARAP10276 MIR520G-201ENST00000385064 90 ntBASIC3.4□□□□□ -1.87
RARAP10276 MIR1253-201ENST00000408273 105 ntBASIC3.4□□□□□ -1.87
RARAP10276 AL031737.1-201ENST00000450125 223 ntBASIC3.4□□□□□ -1.87
RARAP10276 RNA5SP236-201ENST00000516169 116 ntBASIC3.4□□□□□ -1.87
RARAP10276 RNU6-504P-201ENST00000516568 104 ntBASIC3.4□□□□□ -1.87
RARAP10276 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.4□□□□□ -1.87
RARAP10276 AC073346.2-201ENST00000624724 2058 ntBASIC3.4□□□□□ -1.87
RARAP10276 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
RARAP10276 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RARAP10276 RNU6-743P-201ENST00000364151 106 ntBASIC3.39□□□□□ -1.87
RARAP10276 MIR218-1-201ENST00000384999 110 ntBASIC3.39□□□□□ -1.87
RARAP10276 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.39□□□□□ -1.87
RARAP10276 AC093259.1-201ENST00000509755 300 ntBASIC3.39□□□□□ -1.87
RARAP10276 MRPS17P9-201ENST00000511924 393 ntBASIC3.39□□□□□ -1.87
RARAP10276 RNA5SP217-201ENST00000515959 91 ntBASIC3.39□□□□□ -1.87
RARAP10276 SCARNA3-201ENST00000517097 143 ntBASIC3.39□□□□□ -1.87
RARAP10276 AC073413.2-201ENST00000604332 360 ntBASIC3.39□□□□□ -1.87
RARAP10276 uc_338.28-201ENST00000612082 187 ntBASIC3.39□□□□□ -1.87
RARAP10276 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.39□□□□□ -1.87
RARAP10276 MIR8058-201ENST00000615737 89 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms