Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DOAP06340 AC027419.1-201ENST00000522976 328 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 AC100767.1-201ENST00000528178 123 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DOAP06340 MIR1248-201ENST00000629190 106 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DOAP06340 MIR7157-201ENST00000635801 60 ntBASIC2.64□□□□□ -1.99
HLA-DOAP06340 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DOAP06340 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DOAP06340 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DOAP06340 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DOAP06340 FAM35CP-201ENST00000554755 2470 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 RNU1-23P-201ENST00000363361 144 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 Y_RNA.238-201ENST00000364441 102 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 Y_RNA.310-201ENST00000365063 113 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 RNU1-51P-201ENST00000365345 176 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 Y_RNA.361-201ENST00000365515 120 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 SNORA72.4-201ENST00000384174 132 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 MIR504-201ENST00000385065 83 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 RNU6-220P-201ENST00000390919 107 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 FO393413.1-201ENST00000402892 195 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 MIR1283-1-201ENST00000408494 87 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 SNORA11.4-201ENST00000408823 129 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 RNU7-57P-201ENST00000459540 60 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DOAP06340 AC090616.3-201ENST00000582184 217 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 AC004832.4-201ENST00000608952 331 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DOAP06340 AC013791.1-201ENST00000616619 62 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HLA-DOAP06340 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DOAP06340 AC103988.1-201ENST00000566382 2177 ntBASIC2.63□□□□□ -1.99
HLA-DOAP06340 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DOAP06340 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
HLA-DOAP06340 Y_RNA.7-201ENST00000362352 102 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 Y_RNA.182-201ENST00000363880 111 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 RNU6-234P-201ENST00000365229 104 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 Y_RNA.341-201ENST00000365341 102 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 SNORA26.7-201ENST00000391288 122 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 AL513477.1-202ENST00000417061 214 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DOAP06340 AC092427.1-202ENST00000430569 476 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 RNU7-141P-201ENST00000459304 62 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 CKS1BP2-201ENST00000497342 240 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 SCARNA8-201ENST00000515924 131 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 RNA5SP200-201ENST00000516360 103 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 RNU6-453P-201ENST00000516819 85 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DOAP06340 MIR3117-201ENST00000584034 78 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 MIR5739-201ENST00000619803 80 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 MAPK10-266ENST00000641066 6555 ntBASIC2.62□□□□□ -1.99
HLA-DOAP06340 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HLA-DOAP06340 RNU6-461P-201ENST00000364195 107 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 Y_RNA.293-201ENST00000364908 93 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 RNU4-17P-201ENST00000365598 141 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 RNU6-418P-201ENST00000384035 107 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 SNORA20B-201ENST00000384220 132 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 SNORD116-13-201ENST00000384408 92 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 RNU6-1248P-201ENST00000391096 64 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 RNU6-381P-201ENST00000391259 108 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 RNU2-32P-201ENST00000411193 191 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 SEPT7P4-201ENST00000437076 306 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 AL161788.1-201ENST00000441805 169 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DOAP06340 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DOAP06340 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 RNU6-826P-201ENST00000516827 104 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 AC025754.2-201ENST00000606491 432 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 AC009831.4-201ENST00000620744 325 ntBASIC2.61□□□□□ -1.99
HLA-DOAP06340 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DOAP06340 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DOAP06340 Y_RNA.24-201ENST00000362508 103 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 SNORD114-1-201ENST00000362705 72 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 Y_RNA.287-201ENST00000364853 94 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 Y_RNA.368-201ENST00000365547 113 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 SNORD116-18-201ENST00000383961 92 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 Y_RNA.441-201ENST00000384123 112 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 SNORA64-201ENST00000384674 134 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 RNU6-57P-201ENST00000411348 103 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 SCARNA16.3-201ENST00000516595 184 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 PRELID2P1-201ENST00000552837 301 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 MIR7843-201ENST00000622274 79 ntBASIC2.6□□□□□ -1.99
HLA-DOAP06340 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DOAP06340 AC110774.1-201ENST00000623567 2018 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
HLA-DOAP06340 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 Y_RNA.272-201ENST00000364696 102 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 RNU6-546P-201ENST00000383991 107 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 AL606753.1-201ENST00000427435 87 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 SNORD65B-201ENST00000459126 73 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 RNA5SP272-201ENST00000516095 111 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 RNU6-63P-201ENST00000516690 95 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DOAP06340 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HLA-DOAP06340 AL078604.3-201ENST00000615580 211 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 MIR219B-201ENST00000637023 88 ntBASIC2.59□□□□□ -1.99
HLA-DOAP06340 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.59□□□□□ -2
HLA-DOAP06340 AC092881.1-201ENST00000638218 2733 ntBASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms