Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNA5SP48-201ENST00000363969 126 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 RNU6-654P-201ENST00000364373 107 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 RNU6-117P-201ENST00000365415 107 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 RNU6-1103P-201ENST00000384150 107 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 MIR573-201ENST00000384964 99 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 CALM2P3-201ENST00000400429 449 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 MIR1298-201ENST00000408783 112 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 RNU6-1304P-201ENST00000411374 106 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.11□□□□□ -2.39
HLA-DQB2P05538 AL353572.1-201ENST00000442490 417 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 AC114811.1-201ENST00000507207 168 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.11□□□□□ -2.39
HLA-DQB2P05538 SNORA40.12-201ENST00000516329 111 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.11□□□□□ -2.39
HLA-DQB2P05538 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.11□□□□□ -2.39
HLA-DQB2P05538 MIR4431-201ENST00000579990 94 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.11□□□□□ -2.39
HLA-DQB2P05538 AC010487.4-201ENST00000637027 61 ntBASIC0.11□□□□□ -2.39
HLA-DQB2P05538 MIR1-1-201ENST00000362147 71 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 SNORD68-201ENST00000363214 84 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNU4-66P-201ENST00000365199 138 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNU4-20P-201ENST00000365601 151 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 Y_RNA.393-201ENST00000383936 102 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNU6-790P-201ENST00000384479 105 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 MIR520G-201ENST00000385064 90 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 MIR1302-7-201ENST00000408841 72 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNA5SP95-201ENST00000410319 137 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 AL365203.2-201ENST00000423444 196 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 AL137792.2-201ENST00000443484 235 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 MTND1P27-201ENST00000451117 902 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 PCNPP5-201ENST00000452246 481 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNU6-1208P-201ENST00000459588 107 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.1□□□□□ -2.39
HLA-DQB2P05538 MTCO2P30-201ENST00000503662 364 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNA5SP401-201ENST00000515920 127 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNU6-1278P-201ENST00000516130 107 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 RNU6-1096P-201ENST00000517089 102 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.1□□□□□ -2.39
HLA-DQB2P05538 AC093027.1-201ENST00000546698 429 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 MIR4764-201ENST00000580680 88 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 AC100812.1-201ENST00000607622 580 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 AC092807.2-201ENST00000609367 243 ntBASIC0.1□□□□□ -2.39
HLA-DQB2P05538 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
HLA-DQB2P05538 SNORD14.1-201ENST00000365609 90 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 SNORA2B-201ENST00000384583 137 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 RNU6-136P-201ENST00000384663 107 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 EIF4E2P1-201ENST00000393781 255 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 AL606489.2-201ENST00000433886 234 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 MTCO3P10-201ENST00000455912 772 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 RNU7-187P-201ENST00000458985 68 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 MIR3684-201ENST00000579779 74 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 AC104695.3-201ENST00000604052 296 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 Z94722.1-201ENST00000604328 474 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 AL162730.1-201ENST00000605734 292 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 AC073534.2-201ENST00000620377 381 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 AC121333.1-201ENST00000567488 2709 ntBASIC0.09□□□□□ -2.4
HLA-DQB2P05538 RNU6-369P-201ENST00000362515 102 ntBASIC0.08□□□□□ -2.4
HLA-DQB2P05538 U8.5-201ENST00000364528 136 ntBASIC0.08□□□□□ -2.4
HLA-DQB2P05538 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.08□□□□□ -2.4
HLA-DQB2P05538 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.08□□□□□ -2.4
HLA-DQB2P05538 RNU7-43P-201ENST00000516554 64 ntBASIC0.08□□□□□ -2.4
HLA-DQB2P05538 SNORA18.7-201ENST00000516910 131 ntBASIC0.08□□□□□ -2.4
HLA-DQB2P05538 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.08□□□□□ -2.4
HLA-DQB2P05538 AC040904.1-201ENST00000590850 223 ntBASIC0.08□□□□□ -2.4
HLA-DQB2P05538 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.08□□□□□ -2.4
HLA-DQB2P05538 MIR18A-201ENST00000362310 71 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 RNU4-67P-201ENST00000364569 141 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 AC117470.1-201ENST00000381974 330 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 RNY1P4-201ENST00000384595 115 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 MTCYBP4-201ENST00000401524 249 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 AC073464.1-201ENST00000429823 534 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.07□□□□□ -2.4
HLA-DQB2P05538 RPS3AP17-201ENST00000472594 777 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 NDUFA4P2-201ENST00000489989 244 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.07□□□□□ -2.4
HLA-DQB2P05538 AC074133.1-201ENST00000515696 183 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 AC026371.1-201ENST00000551867 419 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.07□□□□□ -2.4
HLA-DQB2P05538 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.07□□□□□ -2.4
HLA-DQB2P05538 Y_RNA.151-201ENST00000363566 112 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 MIR136-201ENST00000385207 82 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC243428.1-201ENST00000421099 264 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC046134.1-201ENST00000514454 666 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 Y_RNA.683-201ENST00000516508 93 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 RNU4-77P-201ENST00000516692 156 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 MIR4762-201ENST00000585261 75 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC012433.1-201ENST00000588916 398 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC027449.1-201ENST00000608890 407 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC104260.1-201ENST00000616660 539 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC022960.3-201ENST00000619794 441 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC015726.2-201ENST00000620112 122 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC092634.7-201ENST00000621022 103 ntBASIC0.06□□□□□ -2.4
HLA-DQB2P05538 AC127459.3-201ENST00000624328 466 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms