Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SNORA12.1-201ENST00000390873 148 ntBASIC0.85□□□□□ -2.27
CD74P04233 ELOCP21-201ENST00000412558 336 ntBASIC0.85□□□□□ -2.27
CD74P04233 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.85□□□□□ -2.27
CD74P04233 AC092991.1-201ENST00000477176 376 ntBASIC0.85□□□□□ -2.27
CD74P04233 AC093852.1-201ENST00000503587 266 ntBASIC0.85□□□□□ -2.27
CD74P04233 AC097462.1-201ENST00000514125 324 ntBASIC0.85□□□□□ -2.27
CD74P04233 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.85□□□□□ -2.27
CD74P04233 SCARNA16.2-201ENST00000516520 172 ntBASIC0.85□□□□□ -2.27
CD74P04233 RNU6-358P-201ENST00000516564 75 ntBASIC0.85□□□□□ -2.27
CD74P04233 RNU6-922P-201ENST00000516753 99 ntBASIC0.85□□□□□ -2.27
CD74P04233 RNU6-1213P-201ENST00000517075 94 ntBASIC0.85□□□□□ -2.27
CD74P04233 MIR3664-201ENST00000579074 99 ntBASIC0.85□□□□□ -2.27
CD74P04233 MIR4661-201ENST00000582720 75 ntBASIC0.85□□□□□ -2.27
CD74P04233 MIR1244-1-201ENST00000612829 85 ntBASIC0.85□□□□□ -2.27
CD74P04233 AC104260.1-201ENST00000616660 539 ntBASIC0.85□□□□□ -2.27
CD74P04233 MIR1244-3-201ENST00000635744 85 ntBASIC0.85□□□□□ -2.27
CD74P04233 MIR6079-201ENST00000635807 62 ntBASIC0.85□□□□□ -2.27
CD74P04233 MIR1244-2-201ENST00000636449 85 ntBASIC0.85□□□□□ -2.27
CD74P04233 MIR1244-4-202ENST00000636813 85 ntBASIC0.85□□□□□ -2.27
CD74P04233 AC068137.4-201ENST00000638485 296 ntBASIC0.85□□□□□ -2.27
CD74P04233 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.27
CD74P04233 Y_RNA.224-201ENST00000364308 111 ntBASIC0.84□□□□□ -2.27
CD74P04233 Y_RNA.265-201ENST00000364677 108 ntBASIC0.84□□□□□ -2.27
CD74P04233 RNU6-593P-201ENST00000364716 112 ntBASIC0.84□□□□□ -2.27
CD74P04233 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
CD74P04233 Y_RNA.339-201ENST00000365325 102 ntBASIC0.84□□□□□ -2.27
CD74P04233 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CD74P04233 RNU6-1145P-201ENST00000384246 107 ntBASIC0.84□□□□□ -2.27
CD74P04233 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.84□□□□□ -2.27
CD74P04233 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.84□□□□□ -2.27
CD74P04233 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.84□□□□□ -2.27
CD74P04233 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.84□□□□□ -2.27
CD74P04233 RNU7-94P-201ENST00000459576 63 ntBASIC0.84□□□□□ -2.27
CD74P04233 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.84□□□□□ -2.27
CD74P04233 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.84□□□□□ -2.27
CD74P04233 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
CD74P04233 RNU7-30P-201ENST00000516835 62 ntBASIC0.84□□□□□ -2.27
CD74P04233 AC105029.1-201ENST00000520250 669 ntBASIC0.84□□□□□ -2.27
CD74P04233 AC018448.1-201ENST00000552843 316 ntBASIC0.84□□□□□ -2.27
CD74P04233 RPL21P9-201ENST00000556149 474 ntBASIC0.84□□□□□ -2.27
CD74P04233 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.84□□□□□ -2.27
CD74P04233 AL022345.2-201ENST00000606307 135 ntBASIC0.84□□□□□ -2.27
CD74P04233 AC073349.3-201ENST00000617616 186 ntBASIC0.84□□□□□ -2.27
CD74P04233 Y_RNA.355-201ENST00000365462 98 ntBASIC0.83□□□□□ -2.28
CD74P04233 RNU6-1264P-201ENST00000383891 107 ntBASIC0.83□□□□□ -2.28
CD74P04233 Y_RNA.482-201ENST00000384377 111 ntBASIC0.83□□□□□ -2.28
CD74P04233 RNU6-376P-201ENST00000384731 106 ntBASIC0.83□□□□□ -2.28
CD74P04233 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
CD74P04233 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CD74P04233 AC018865.2-201ENST00000423631 129 ntBASIC0.83□□□□□ -2.28
CD74P04233 UBE2V1P7-201ENST00000446395 340 ntBASIC0.83□□□□□ -2.28
CD74P04233 PCNPP5-201ENST00000452246 481 ntBASIC0.83□□□□□ -2.28
CD74P04233 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.83□□□□□ -2.28
CD74P04233 AC091021.1-201ENST00000468051 388 ntBASIC0.83□□□□□ -2.28
CD74P04233 MTND4P17-201ENST00000470444 350 ntBASIC0.83□□□□□ -2.28
CD74P04233 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.83□□□□□ -2.28
CD74P04233 RNA5SP20-201ENST00000515976 84 ntBASIC0.83□□□□□ -2.28
CD74P04233 RNU6-120P-201ENST00000516077 103 ntBASIC0.83□□□□□ -2.28
CD74P04233 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.83□□□□□ -2.28
CD74P04233 RNU2-56P-201ENST00000516826 190 ntBASIC0.83□□□□□ -2.28
CD74P04233 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.83□□□□□ -2.28
CD74P04233 MIR4452-201ENST00000583004 71 ntBASIC0.83□□□□□ -2.28
CD74P04233 AC136443.5-201ENST00000603741 370 ntBASIC0.83□□□□□ -2.28
CD74P04233 AC092794.2-201ENST00000620933 563 ntBASIC0.83□□□□□ -2.28
CD74P04233 AC027335.2-201ENST00000624030 375 ntBASIC0.83□□□□□ -2.28
CD74P04233 AC006435.5-201ENST00000624486 112 ntBASIC0.83□□□□□ -2.28
CD74P04233 CASC19-280ENST00000642102 1351 ntBASIC0.83□□□□□ -2.28
CD74P04233 Y_RNA.72-201ENST00000362894 103 ntBASIC0.82□□□□□ -2.28
CD74P04233 Y_RNA.160-201ENST00000363677 92 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNU4-76P-201ENST00000364509 141 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNU6-767P-201ENST00000384132 107 ntBASIC0.82□□□□□ -2.28
CD74P04233 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNU6-505P-201ENST00000384427 107 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNU6-136P-201ENST00000384663 107 ntBASIC0.82□□□□□ -2.28
CD74P04233 MIR660-201ENST00000385235 97 ntBASIC0.82□□□□□ -2.28
CD74P04233 SNORA75.4-201ENST00000391278 119 ntBASIC0.82□□□□□ -2.28
CD74P04233 MTCYBP4-201ENST00000401524 249 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNA5SP475-201ENST00000410568 110 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNU6-1304P-201ENST00000411374 106 ntBASIC0.82□□□□□ -2.28
CD74P04233 MTCO3P19-201ENST00000415864 321 ntBASIC0.82□□□□□ -2.28
CD74P04233 POLR2J4-204ENST00000418424 324 ntBASIC0.82□□□□□ -2.28
CD74P04233 CALM2P4-201ENST00000430810 426 ntBASIC0.82□□□□□ -2.28
CD74P04233 HSPE1P13-201ENST00000451143 297 ntBASIC0.82□□□□□ -2.28
CD74P04233 AC093850.1-201ENST00000454121 251 ntBASIC0.82□□□□□ -2.28
CD74P04233 AC233266.1-201ENST00000454518 96 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNU6-625P-201ENST00000459412 107 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNU6-1291P-201ENST00000516591 104 ntBASIC0.82□□□□□ -2.28
CD74P04233 RNA5SP168-201ENST00000516642 112 ntBASIC0.82□□□□□ -2.28
CD74P04233 CYCSP23-201ENST00000519781 313 ntBASIC0.82□□□□□ -2.28
CD74P04233 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.82□□□□□ -2.28
CD74P04233 AP002001.1-203ENST00000534002 267 ntBASIC0.82□□□□□ -2.28
CD74P04233 BX284668.6-201ENST00000606899 438 ntBASIC0.82□□□□□ -2.28
CD74P04233 AC242852.1-201ENST00000612151 96 ntBASIC0.82□□□□□ -2.28
CD74P04233 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.82□□□□□ -2.28
CD74P04233 AL513423.1-201ENST00000621695 132 ntBASIC0.82□□□□□ -2.28
CD74P04233 AC244015.1-201ENST00000622301 99 ntBASIC0.82□□□□□ -2.28
CD74P04233 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CD74P04233 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CD74P04233 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms