Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 U2.2-201ENST00000616535 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.3-201ENST00000617785 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.19-201ENST00000618602 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 RNU2-1-201ENST00000618664 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.6-201ENST00000619225 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.5-201ENST00000619465 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.10-201ENST00000620268 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS4BO75351 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VPS4BO75351 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS4BO75351 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS4BO75351 RNU6-271P-201ENST00000363858 105 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 Y_RNA.200-201ENST00000364018 102 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 Y_RNA.292-201ENST00000364904 97 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 Y_RNA.456-201ENST00000384232 111 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 Y_RNA.590-201ENST00000410140 107 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 EDDM3CP-201ENST00000415977 425 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS4BO75351 Z98742.3-201ENST00000418637 326 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 RNU7-26P-201ENST00000458980 63 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 SUMO2P18-201ENST00000518873 252 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 CYCSP26-201ENST00000534107 320 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 AC073349.3-201ENST00000617616 186 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 snoU18.1-201ENST00000629629 71 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS4BO75351 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS4BO75351 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS4BO75351 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS4BO75351 Y_RNA.124-201ENST00000363339 93 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 SNORA67.4-201ENST00000384688 142 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 RNU6-482P-201ENST00000391068 107 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 MIR1262-201ENST00000408276 93 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 MIR1298-201ENST00000408783 112 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 RNU4-53P-201ENST00000410828 140 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS4BO75351 AL353689.1-201ENST00000438895 199 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 RPS26P55-201ENST00000471178 356 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS4BO75351 SNORA4.4-201ENST00000515921 135 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 SNORD116-28-201ENST00000516123 91 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 Y_RNA.676-201ENST00000516393 96 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS4BO75351 AC015712.3-201ENST00000559380 164 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 U4.3-201ENST00000621047 82 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VPS4BO75351 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS4BO75351 ZNF271P-202ENST00000465539 1970 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 Y_RNA.274-201ENST00000364714 101 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 RNU1-148P-201ENST00000384472 162 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 Y_RNA.626-201ENST00000411288 95 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 AC060773.1-201ENST00000421698 310 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 Z98949.2-201ENST00000440996 144 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS4BO75351 RPL36AP21-201ENST00000490372 323 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS4BO75351 MIR4648-201ENST00000580107 72 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 MIR4658-201ENST00000584344 65 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 AL008718.3-201ENST00000610217 321 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS4BO75351 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
VPS4BO75351 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS4BO75351 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
VPS4BO75351 SNORD114-6-201ENST00000364393 72 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 Y_RNA.304-201ENST00000365011 112 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 RNU6-211P-201ENST00000384047 107 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 MT-TR-201ENST00000387439 65 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 RNU6-763P-201ENST00000390865 106 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 SNORA26.5-201ENST00000391215 123 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS4BO75351 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS4BO75351 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS4BO75351 AL353149.1-201ENST00000610667 244 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS4BO75351 CENPCP1-201ENST00000533085 2578 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS4BO75351 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS4BO75351 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VPS4BO75351 Y_RNA.83-201ENST00000363005 113 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 Y_RNA.199-201ENST00000364014 102 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 RNU6-117P-201ENST00000365415 107 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 SNORA72.4-201ENST00000384174 132 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 AL591806.2-201ENST00000433122 173 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 RNA5SP20-201ENST00000515976 84 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 Y_RNA.679-201ENST00000516416 91 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 CBX3P4-201ENST00000538909 354 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS4BO75351 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS4BO75351 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS4BO75351 MIR411-201ENST00000362239 96 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 Y_RNA.172-201ENST00000363765 102 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 RNU6-1164P-201ENST00000364428 107 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 Y_RNA.297-201ENST00000364950 91 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 Y_RNA.341-201ENST00000365341 102 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 RNU6-855P-201ENST00000410395 104 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms