Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 U2.2-201ENST00000616535 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.3-201ENST00000617785 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.19-201ENST00000618602 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 RNU2-1-201ENST00000618664 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.6-201ENST00000619225 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.5-201ENST00000619465 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 U2.10-201ENST00000620268 191 ntBASIC2.45□□□□□ -2.02
VPS4BO75351 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS4BO75351 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VPS4BO75351 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS4BO75351 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS4BO75351 RNU6-271P-201ENST00000363858 105 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 Y_RNA.200-201ENST00000364018 102 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 Y_RNA.292-201ENST00000364904 97 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 Y_RNA.456-201ENST00000384232 111 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 Y_RNA.590-201ENST00000410140 107 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 EDDM3CP-201ENST00000415977 425 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS4BO75351 Z98742.3-201ENST00000418637 326 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 RNU7-26P-201ENST00000458980 63 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 SUMO2P18-201ENST00000518873 252 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 CYCSP26-201ENST00000534107 320 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 AC073349.3-201ENST00000617616 186 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 snoU18.1-201ENST00000629629 71 ntBASIC2.44□□□□□ -2.02
VPS4BO75351 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS4BO75351 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS4BO75351 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS4BO75351 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS4BO75351 Y_RNA.124-201ENST00000363339 93 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 SNORA67.4-201ENST00000384688 142 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 RNU6-482P-201ENST00000391068 107 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 MIR1262-201ENST00000408276 93 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 MIR1298-201ENST00000408783 112 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 RNU4-53P-201ENST00000410828 140 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS4BO75351 AL353689.1-201ENST00000438895 199 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 RPS26P55-201ENST00000471178 356 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS4BO75351 SNORA4.4-201ENST00000515921 135 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 SNORD116-28-201ENST00000516123 91 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 Y_RNA.676-201ENST00000516393 96 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS4BO75351 AC015712.3-201ENST00000559380 164 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 U4.3-201ENST00000621047 82 ntBASIC2.43□□□□□ -2.02
VPS4BO75351 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VPS4BO75351 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS4BO75351 ZNF271P-202ENST00000465539 1970 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 Y_RNA.274-201ENST00000364714 101 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 RNU1-148P-201ENST00000384472 162 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 Y_RNA.626-201ENST00000411288 95 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 AC060773.1-201ENST00000421698 310 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 Z98949.2-201ENST00000440996 144 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS4BO75351 RPL36AP21-201ENST00000490372 323 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS4BO75351 MIR4648-201ENST00000580107 72 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 MIR4658-201ENST00000584344 65 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 AL008718.3-201ENST00000610217 321 ntBASIC2.42□□□□□ -2.02
VPS4BO75351 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS4BO75351 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
VPS4BO75351 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS4BO75351 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
VPS4BO75351 SNORD114-6-201ENST00000364393 72 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 Y_RNA.304-201ENST00000365011 112 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 RNU6-211P-201ENST00000384047 107 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 MT-TR-201ENST00000387439 65 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 RNU6-763P-201ENST00000390865 106 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 SNORA26.5-201ENST00000391215 123 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS4BO75351 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS4BO75351 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS4BO75351 AL353149.1-201ENST00000610667 244 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS4BO75351 CENPCP1-201ENST00000533085 2578 ntBASIC2.41□□□□□ -2.02
VPS4BO75351 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS4BO75351 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS4BO75351 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VPS4BO75351 Y_RNA.83-201ENST00000363005 113 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 Y_RNA.199-201ENST00000364014 102 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 RNU6-117P-201ENST00000365415 107 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 SNORA72.4-201ENST00000384174 132 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 AL591806.2-201ENST00000433122 173 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 RNA5SP20-201ENST00000515976 84 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 Y_RNA.679-201ENST00000516416 91 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 CBX3P4-201ENST00000538909 354 ntBASIC2.4□□□□□ -2.03
VPS4BO75351 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS4BO75351 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS4BO75351 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS4BO75351 MIR411-201ENST00000362239 96 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 Y_RNA.172-201ENST00000363765 102 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 RNU6-1164P-201ENST00000364428 107 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 Y_RNA.297-201ENST00000364950 91 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 Y_RNA.341-201ENST00000365341 102 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 RNU6-855P-201ENST00000410395 104 ntBASIC2.39□□□□□ -2.03
VPS4BO75351 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms