Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.27□□□□□ -2.05
CNOT3O75175 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.27□□□□□ -2.05
CNOT3O75175 AL356280.1-201ENST00000603614 379 ntBASIC2.27□□□□□ -2.05
CNOT3O75175 AL365265.1-201ENST00000621045 234 ntBASIC2.27□□□□□ -2.05
CNOT3O75175 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CNOT3O75175 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.27□□□□□ -2.05
CNOT3O75175 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.27□□□□□ -2.05
CNOT3O75175 AC016717.2-201ENST00000609089 5141 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 Y_RNA.180-201ENST00000363867 113 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 SNORD31B-201ENST00000364977 69 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 Y_RNA.304-201ENST00000365011 112 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 RNU6-418P-201ENST00000384035 107 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 RNU4-52P-201ENST00000384209 138 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 SNORA70B-201ENST00000384210 135 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 SNORA40.19-201ENST00000390846 128 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 MTCO2P33-201ENST00000402100 465 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 MIR1261-201ENST00000408659 82 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 RNU2-63P-201ENST00000410792 194 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 AC090255.1-201ENST00000495779 349 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 SNORA70.12-201ENST00000516084 153 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 RNA5SP490-201ENST00000517141 136 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.26□□□□□ -2.05
CNOT3O75175 AC021269.2-201ENST00000532318 330 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.26□□□□□ -2.05
CNOT3O75175 AC072026.1-201ENST00000605023 201 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 snoZ196.1-201ENST00000625269 89 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 MIR1248-201ENST00000629190 106 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 MIR203B-201ENST00000636080 86 ntBASIC2.26□□□□□ -2.05
CNOT3O75175 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CNOT3O75175 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CNOT3O75175 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CNOT3O75175 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 RNU1-23P-201ENST00000363361 144 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 RNU6-1048P-201ENST00000364054 107 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 Y_RNA.293-201ENST00000364908 93 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 Y_RNA.341-201ENST00000365341 102 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 RNA5SP240-201ENST00000365355 128 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 RNU1-52P-201ENST00000384190 164 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 AL357139.1-201ENST00000407792 426 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 MIR548M-201ENST00000408260 86 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
CNOT3O75175 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 U8.19-201ENST00000459095 133 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 AC080013.2-201ENST00000460866 323 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.25□□□□□ -2.05
CNOT3O75175 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.25□□□□□ -2.05
CNOT3O75175 AC018630.3-201ENST00000542637 96 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 AL355297.2-201ENST00000604792 129 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 AC025754.2-201ENST00000606491 432 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.25□□□□□ -2.05
CNOT3O75175 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 MIR1291-201ENST00000627649 87 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
CNOT3O75175 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.24□□□□□ -2.05
CNOT3O75175 AC245060.5-201ENST00000610778 3293 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 Y_RNA.124-201ENST00000363339 93 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 RNU6-682P-201ENST00000363843 106 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 SNORA38-201ENST00000363946 132 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 Y_RNA.287-201ENST00000364853 94 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 RNU6-407P-201ENST00000365280 104 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 RNU6-975P-201ENST00000384296 105 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 SNORA26.5-201ENST00000391215 123 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 RN7SKP51-201ENST00000410781 304 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.24□□□□□ -2.05
CNOT3O75175 AL135790.2-201ENST00000437701 267 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 HMGN2P18-201ENST00000450680 270 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 Y_RNA.637-201ENST00000459424 114 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 AC074198.2-201ENST00000508153 258 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 Y_RNA.662-201ENST00000516028 97 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 RNU6-991P-201ENST00000516168 107 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 RNA5SP281-201ENST00000516504 135 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 AC136628.3-201ENST00000521868 290 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 AC022616.8-201ENST00000533569 253 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 MIR4308-201ENST00000580634 81 ntBASIC2.24□□□□□ -2.05
CNOT3O75175 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CNOT3O75175 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CNOT3O75175 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 RNU6-801P-201ENST00000364087 105 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 Y_RNA.233-201ENST00000364407 101 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 RNU6-918P-201ENST00000391219 106 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 HSPE1P21-201ENST00000438283 308 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 AC010409.1-201ENST00000487382 476 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 RNU6-948P-201ENST00000516374 107 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CNOT3O75175 MIR3684-201ENST00000579779 74 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
CNOT3O75175 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.23□□□□□ -2.05
CNOT3O75175 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CNOT3O75175 RNU6-774P-201ENST00000363238 107 ntBASIC2.22□□□□□ -2.05
CNOT3O75175 RNA5SP37-201ENST00000365420 130 ntBASIC2.22□□□□□ -2.05
CNOT3O75175 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
CNOT3O75175 SNORA72.4-201ENST00000384174 132 ntBASIC2.22□□□□□ -2.05
CNOT3O75175 SNORA20B-201ENST00000384220 132 ntBASIC2.22□□□□□ -2.05
CNOT3O75175 RNU6-220P-201ENST00000390919 107 ntBASIC2.22□□□□□ -2.05
CNOT3O75175 PCNPP3-201ENST00000393579 471 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms