Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF40O75150 PPIAP15-201ENST00000479662 484 ntBASIC4.11□□□□□ -1.75
RNF40O75150 SNORA70.14-201ENST00000516205 110 ntBASIC4.11□□□□□ -1.75
RNF40O75150 RNU6-267P-201ENST00000516714 103 ntBASIC4.11□□□□□ -1.75
RNF40O75150 AC025627.2-201ENST00000576220 160 ntBASIC4.11□□□□□ -1.75
RNF40O75150 MIR4777-201ENST00000583710 86 ntBASIC4.11□□□□□ -1.75
RNF40O75150 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF40O75150 MIR1255B1-201ENST00000636325 63 ntBASIC4.11□□□□□ -1.75
RNF40O75150 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF40O75150 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RNF40O75150 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF40O75150 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RNF40O75150 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF40O75150 SNORD115-28-201ENST00000363931 81 ntBASIC4.1□□□□□ -1.75
RNF40O75150 RNU6-438P-201ENST00000365561 103 ntBASIC4.1□□□□□ -1.75
RNF40O75150 MIR7-3-201ENST00000384898 110 ntBASIC4.1□□□□□ -1.75
RNF40O75150 RNA5SP38-201ENST00000410750 119 ntBASIC4.1□□□□□ -1.75
RNF40O75150 AC093578.1-201ENST00000415219 368 ntBASIC4.1□□□□□ -1.75
RNF40O75150 AL159169.1-201ENST00000421119 127 ntBASIC4.1□□□□□ -1.75
RNF40O75150 AC073261.1-201ENST00000429409 121 ntBASIC4.1□□□□□ -1.75
RNF40O75150 RPS29P31-201ENST00000446147 164 ntBASIC4.1□□□□□ -1.75
RNF40O75150 RN7SL271P-201ENST00000487601 295 ntBASIC4.1□□□□□ -1.75
RNF40O75150 RN7SL323P-201ENST00000494712 295 ntBASIC4.1□□□□□ -1.75
RNF40O75150 RN7SKP83-201ENST00000516512 178 ntBASIC4.1□□□□□ -1.75
RNF40O75150 RNA5SP309-201ENST00000516670 106 ntBASIC4.1□□□□□ -1.75
RNF40O75150 AL358944.1-201ENST00000528537 144 ntBASIC4.1□□□□□ -1.75
RNF40O75150 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RNF40O75150 RNVU1-4-201ENST00000612985 164 ntBASIC4.1□□□□□ -1.75
RNF40O75150 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF40O75150 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
RNF40O75150 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF40O75150 MIR340-201ENST00000362125 95 ntBASIC4.09□□□□□ -1.75
RNF40O75150 SNORD35B-201ENST00000363660 87 ntBASIC4.09□□□□□ -1.75
RNF40O75150 RNU6-743P-201ENST00000364151 106 ntBASIC4.09□□□□□ -1.75
RNF40O75150 Y_RNA.507-201ENST00000384500 99 ntBASIC4.09□□□□□ -1.75
RNF40O75150 MIR1251-201ENST00000408552 70 ntBASIC4.09□□□□□ -1.75
RNF40O75150 RNU7-99P-201ENST00000516271 62 ntBASIC4.09□□□□□ -1.75
RNF40O75150 RNU6-1018P-201ENST00000516577 106 ntBASIC4.09□□□□□ -1.75
RNF40O75150 RNU6-341P-201ENST00000516973 96 ntBASIC4.09□□□□□ -1.75
RNF40O75150 SNORA31.21-201ENST00000517180 77 ntBASIC4.09□□□□□ -1.75
RNF40O75150 CYCSP30-201ENST00000546447 172 ntBASIC4.09□□□□□ -1.75
RNF40O75150 Y_RNA.773-201ENST00000607168 90 ntBASIC4.09□□□□□ -1.75
RNF40O75150 AC091932.4-201ENST00000623386 200 ntBASIC4.09□□□□□ -1.75
RNF40O75150 AC091304.10-201ENST00000641554 121 ntBASIC4.09□□□□□ -1.75
RNF40O75150 MIR126-201ENST00000362291 85 ntBASIC4.08□□□□□ -1.76
RNF40O75150 RNU6-363P-201ENST00000362895 105 ntBASIC4.08□□□□□ -1.76
RNF40O75150 Y_RNA.437-201ENST00000384113 113 ntBASIC4.08□□□□□ -1.76
RNF40O75150 SNORD116-22-201ENST00000384430 92 ntBASIC4.08□□□□□ -1.76
RNF40O75150 Y_RNA.547-201ENST00000384654 119 ntBASIC4.08□□□□□ -1.76
RNF40O75150 MRPL35P3-201ENST00000421557 364 ntBASIC4.08□□□□□ -1.76
RNF40O75150 HMGN2P34-201ENST00000437647 269 ntBASIC4.08□□□□□ -1.76
RNF40O75150 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF40O75150 AC233266.1-201ENST00000454518 96 ntBASIC4.08□□□□□ -1.76
RNF40O75150 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF40O75150 AL161912.2-201ENST00000565707 3007 ntBASIC4.08□□□□□ -1.76
RNF40O75150 AC242852.1-201ENST00000612151 96 ntBASIC4.08□□□□□ -1.76
RNF40O75150 AC244015.1-201ENST00000622301 99 ntBASIC4.08□□□□□ -1.76
RNF40O75150 AL049781.1-201ENST00000623195 3585 ntBASIC4.08□□□□□ -1.76
RNF40O75150 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF40O75150 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RNF40O75150 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.08□□□□□ -1.76
RNF40O75150 MAPK10-266ENST00000641066 6555 ntBASIC4.08□□□□□ -1.76
RNF40O75150 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
RNF40O75150 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF40O75150 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF40O75150 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF40O75150 RNA5SP119-201ENST00000362715 117 ntBASIC4.07□□□□□ -1.76
RNF40O75150 RNU6-60P-201ENST00000364792 103 ntBASIC4.07□□□□□ -1.76
RNF40O75150 Y_RNA.454-201ENST00000384224 113 ntBASIC4.07□□□□□ -1.76
RNF40O75150 MIR184-201ENST00000384962 84 ntBASIC4.07□□□□□ -1.76
RNF40O75150 RNA5SP252-201ENST00000391131 119 ntBASIC4.07□□□□□ -1.76
RNF40O75150 AC017083.1-201ENST00000428093 483 ntBASIC4.07□□□□□ -1.76
RNF40O75150 RPL23AP83-201ENST00000434984 473 ntBASIC4.07□□□□□ -1.76
RNF40O75150 AC106707.2-201ENST00000484182 374 ntBASIC4.07□□□□□ -1.76
RNF40O75150 RPS23P4-201ENST00000487908 423 ntBASIC4.07□□□□□ -1.76
RNF40O75150 RNA5SP112-201ENST00000515937 99 ntBASIC4.07□□□□□ -1.76
RNF40O75150 RNU7-70P-201ENST00000516941 66 ntBASIC4.07□□□□□ -1.76
RNF40O75150 RNA5SP179-201ENST00000517284 121 ntBASIC4.07□□□□□ -1.76
RNF40O75150 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF40O75150 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF40O75150 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.07□□□□□ -1.76
RNF40O75150 AC022217.4-201ENST00000604389 163 ntBASIC4.07□□□□□ -1.76
RNF40O75150 AC012314.7-201ENST00000619693 93 ntBASIC4.07□□□□□ -1.76
RNF40O75150 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF40O75150 AC095038.3-201ENST00000634439 195 ntBASIC4.07□□□□□ -1.76
RNF40O75150 MIR6079-201ENST00000635807 62 ntBASIC4.07□□□□□ -1.76
RNF40O75150 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RNF40O75150 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF40O75150 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF40O75150 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF40O75150 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF40O75150 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF40O75150 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
RNF40O75150 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF40O75150 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF40O75150 Y_RNA.190-201ENST00000363964 101 ntBASIC4.06□□□□□ -1.76
RNF40O75150 HSPE1P26-201ENST00000405341 275 ntBASIC4.06□□□□□ -1.76
RNF40O75150 RNU6-733P-201ENST00000410759 104 ntBASIC4.06□□□□□ -1.76
RNF40O75150 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF40O75150 AC060773.1-201ENST00000421698 310 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms