Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC097462.1-201ENST00000514125 324 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AC023157.2-201ENST00000540596 141 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AK6P2-201ENST00000549020 471 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.4□□□□□ -2.35
SHOX2O60902 AL133215.3-201ENST00000609801 448 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AC242852.1-201ENST00000612151 96 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AC240442.1-201ENST00000616055 283 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AL603755.1-201ENST00000619504 163 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 AC244015.1-201ENST00000622301 99 ntBASIC0.4□□□□□ -2.35
SHOX2O60902 Y_RNA.100-201ENST00000363141 102 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 RNU6-873P-201ENST00000363833 107 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 Y_RNA.453-201ENST00000384223 109 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 RNU6-793P-201ENST00000384233 104 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 SNORA8.3-201ENST00000384679 139 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 SNORD89-201ENST00000390981 114 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 SNORD99-201ENST00000408612 74 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 USP9YP29-201ENST00000445112 563 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.39□□□□□ -2.35
SHOX2O60902 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.39□□□□□ -2.35
SHOX2O60902 AC010469.2-201ENST00000496412 480 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 RNU7-172P-201ENST00000517125 64 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 AC040904.1-201ENST00000590850 223 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 AL117336.2-201ENST00000602435 335 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 AL121757.2-201ENST00000611223 313 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 AL136317.1-201ENST00000612653 226 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 AL158063.1-201ENST00000615349 536 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 AC006504.8-201ENST00000621046 635 ntBASIC0.39□□□□□ -2.35
SHOX2O60902 RNA5SP264-201ENST00000363115 107 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 Y_RNA.184-201ENST00000363884 108 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 Y_RNA.559-201ENST00000384686 107 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 EIF4E2P1-201ENST00000393781 255 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 AL590002.1-201ENST00000406554 418 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 AC092423.1-201ENST00000430165 186 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 AL353572.1-201ENST00000442490 417 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 AC079354.2-201ENST00000453523 154 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 SNORA40.12-201ENST00000516329 111 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 RNU6-1110P-201ENST00000516462 101 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
SHOX2O60902 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.38□□□□□ -2.35
SHOX2O60902 MIR3684-201ENST00000579779 74 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 MIR4493-201ENST00000584016 73 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.38□□□□□ -2.35
SHOX2O60902 AL136370.1-201ENST00000608166 691 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 SEPT14P17-201ENST00000617978 177 ntBASIC0.38□□□□□ -2.35
SHOX2O60902 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.38□□□□□ -2.35
SHOX2O60902 SNORD50.1-201ENST00000362987 71 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 RNU6-727P-201ENST00000363592 107 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 SNORD118-201ENST00000363593 134 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 Y_RNA.169-201ENST00000363745 96 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 SNORD95.1-201ENST00000364099 68 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 SNORA72.3-201ENST00000365074 132 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 RNU4-66P-201ENST00000365199 138 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 RNU6-541P-201ENST00000384709 110 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 RNU6-1067P-201ENST00000384752 107 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 MTCO2P19-201ENST00000427513 598 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 AC091179.3-201ENST00000474761 144 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.37□□□□□ -2.35
SHOX2O60902 RNA5SP401-201ENST00000515920 127 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.37□□□□□ -2.35
SHOX2O60902 AC027288.2-201ENST00000553028 243 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.37□□□□□ -2.35
SHOX2O60902 PIGPP4-201ENST00000584447 307 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 AC007014.2-201ENST00000615581 479 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 AC134026.1-201ENST00000623249 2239 ntBASIC0.37□□□□□ -2.35
SHOX2O60902 AC005592.1-201ENST00000566527 1640 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 MIRLET7C-201ENST00000362160 84 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 RNU6-833P-201ENST00000363486 107 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 Y_RNA.330-201ENST00000365230 109 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 Y_RNA.378-201ENST00000365652 113 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SHOX2O60902 CALM2P3-201ENST00000400429 449 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 MIR891A-201ENST00000401237 79 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 MTCO1P20-201ENST00000425366 358 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 RPL23AP50-201ENST00000434149 455 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 MTCO1P19-201ENST00000443487 500 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 AC067940.1-201ENST00000458411 300 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 RNU6-1208P-201ENST00000459588 107 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 AC091021.1-201ENST00000468051 388 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 AC093303.1-201ENST00000514549 295 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 RNU6-1038P-201ENST00000516516 104 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 MTND4LP26-201ENST00000518144 282 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.36□□□□□ -2.35
SHOX2O60902 AP001372.4-201ENST00000524889 472 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 AL118558.2-201ENST00000556294 238 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 MIR5190-201ENST00000581537 80 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 AC131055.1-201ENST00000584626 316 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 AC073534.2-201ENST00000620377 381 ntBASIC0.36□□□□□ -2.35
SHOX2O60902 MIR103A2-201ENST00000362154 78 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 SNORA1B-201ENST00000362535 133 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 SNORD115-41-201ENST00000363608 82 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 Y_RNA.179-201ENST00000363844 90 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 RNA5SP205-201ENST00000364653 136 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 Y_RNA.267-201ENST00000364679 109 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 Y_RNA.336-201ENST00000365307 109 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 RNU6-1335P-201ENST00000365426 107 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms