Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCA5O60264 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCA5O60264 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCA5O60264 MIR203B-201ENST00000636080 86 ntBASIC3.2□□□□□ -1.9
SMARCA5O60264 FO624990.1-201ENST00000636373 85 ntBASIC3.2□□□□□ -1.9
SMARCA5O60264 AC134026.1-201ENST00000623249 2239 ntBASIC3.2□□□□□ -1.9
SMARCA5O60264 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMARCA5O60264 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCA5O60264 RNA5SP393-201ENST00000363423 117 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 RNU6-151P-201ENST00000364158 107 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 SNORD50B-201ENST00000364995 70 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 Y_RNA.332-201ENST00000365271 113 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 RNU6-1264P-201ENST00000383891 107 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 MIR569-201ENST00000385228 96 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 RNU6-257P-201ENST00000410238 98 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 RPL39P40-201ENST00000445481 146 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.19□□□□□ -1.9
SMARCA5O60264 RNU6-479P-201ENST00000516348 105 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 RNU6-107P-201ENST00000516643 102 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCA5O60264 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCA5O60264 AC009127.3-201ENST00000570531 403 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 AC091895.1-201ENST00000624494 256 ntBASIC3.19□□□□□ -1.9
SMARCA5O60264 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SMARCA5O60264 AC009487.4-201ENST00000624969 3585 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCA5O60264 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCA5O60264 RNU6-859P-201ENST00000362728 107 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 Y_RNA.121-201ENST00000363309 113 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 SNORA5B-201ENST00000363786 132 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 SNORD115-30-201ENST00000364117 82 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 AC123900.1-201ENST00000420390 96 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 AC074290.1-201ENST00000448883 135 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 AC011753.1-201ENST00000451001 220 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 AL109933.2-201ENST00000452651 260 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 AC016925.1-201ENST00000458303 298 ntBASIC3.18□□□□□ -1.9
SMARCA5O60264 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SMARCA5O60264 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCA5O60264 Y_RNA.81-201ENST00000362997 102 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 SNORA3A-201ENST00000364113 130 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 RNU6-275P-201ENST00000364910 107 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 RNU6-1168P-201ENST00000390831 104 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 RNU6-1154P-201ENST00000391001 104 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 AL031003.1-201ENST00000404229 172 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 AC114982.1-201ENST00000469402 321 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 RNU6-991P-201ENST00000516168 107 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 RNU1-117P-201ENST00000517041 158 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 AC021269.2-201ENST00000532318 330 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 AC006380.1-201ENST00000603598 186 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 Y_RNA.778-201ENST00000620203 90 ntBASIC3.17□□□□□ -1.9
SMARCA5O60264 Y_RNA.357-201ENST00000365487 109 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 RNU6-1248P-201ENST00000391096 64 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCA5O60264 ATP5EP1-201ENST00000510257 156 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 RNU6-313P-201ENST00000516317 112 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 AC136628.3-201ENST00000521868 290 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCA5O60264 MIR4529-201ENST00000578110 78 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 AL078604.3-201ENST00000615580 211 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 AC013791.1-201ENST00000616619 62 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 MIR3658-201ENST00000636291 56 ntBASIC3.16□□□□□ -1.9
SMARCA5O60264 SNORA67.2-201ENST00000384300 149 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 RNU6-160P-201ENST00000384591 107 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 HMGN2P39-201ENST00000398005 273 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 MIR1262-201ENST00000408276 93 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.15□□□□□ -1.91
SMARCA5O60264 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCA5O60264 CR769767.1-201ENST00000436337 346 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 RPS20P10-201ENST00000451209 253 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 AC005840.1-201ENST00000498412 377 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 AC096725.1-201ENST00000514266 313 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 SCARNA8-201ENST00000515924 131 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 RNU6-62P-201ENST00000516526 102 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 RNU2-34P-201ENST00000516534 121 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 MIR4753-201ENST00000585119 83 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 SNORD11B-201ENST00000607707 90 ntBASIC3.15□□□□□ -1.91
SMARCA5O60264 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCA5O60264 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.91
SMARCA5O60264 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.14□□□□□ -1.91
SMARCA5O60264 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCA5O60264 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMARCA5O60264 RNU6-417P-201ENST00000384712 107 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 MIR586-201ENST00000385035 97 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 RNU6-239P-201ENST00000390990 99 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 MIR1283-1-201ENST00000408494 87 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 AC010409.1-201ENST00000487382 476 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 Y_RNA.797-201ENST00000515977 94 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 RNA5SP320-201ENST00000516263 124 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 RNU7-121P-201ENST00000516604 62 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 RNU6-453P-201ENST00000516819 85 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.14□□□□□ -1.91
SMARCA5O60264 PRELID2P1-201ENST00000552837 301 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.14□□□□□ -1.91
SMARCA5O60264 AC068205.3-201ENST00000636385 468 ntBASIC3.14□□□□□ -1.91
SMARCA5O60264 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SMARCA5O60264 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
SMARCA5O60264 Y_RNA.243-201ENST00000364481 109 ntBASIC3.13□□□□□ -1.91
SMARCA5O60264 Y_RNA.261-201ENST00000364631 102 ntBASIC3.13□□□□□ -1.91
SMARCA5O60264 SNORA72.4-201ENST00000384174 132 ntBASIC3.13□□□□□ -1.91
SMARCA5O60264 RNU6-578P-201ENST00000390980 103 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms