Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 SCARNA24.2-201ENST00000516968 130 ntBASIC1.85□□□□□ -2.11
PRKNO60260 RNU6-1271P-201ENST00000517049 105 ntBASIC1.85□□□□□ -2.11
PRKNO60260 DEFB108E-201ENST00000524692 240 ntBASIC1.85□□□□□ -2.11
PRKNO60260 AC087441.2-201ENST00000529141 262 ntBASIC1.85□□□□□ -2.11
PRKNO60260 MIR3145-201ENST00000580727 82 ntBASIC1.85□□□□□ -2.11
PRKNO60260 SDR42E1P4-201ENST00000620894 481 ntBASIC1.85□□□□□ -2.11
PRKNO60260 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.85□□□□□ -2.11
PRKNO60260 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
PRKNO60260 AL159152.1-201ENST00000635019 2587 ntBASIC1.85□□□□□ -2.11
PRKNO60260 SNORD115-30-201ENST00000364117 82 ntBASIC1.84□□□□□ -2.11
PRKNO60260 RNU6-1164P-201ENST00000364428 107 ntBASIC1.84□□□□□ -2.11
PRKNO60260 RNU6-1240P-201ENST00000365155 104 ntBASIC1.84□□□□□ -2.11
PRKNO60260 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
PRKNO60260 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.84□□□□□ -2.11
PRKNO60260 AC008134.1-201ENST00000420943 193 ntBASIC1.84□□□□□ -2.11
PRKNO60260 AC060773.1-201ENST00000421698 310 ntBASIC1.84□□□□□ -2.11
PRKNO60260 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.84□□□□□ -2.11
PRKNO60260 SNORD127-201ENST00000458892 86 ntBASIC1.84□□□□□ -2.11
PRKNO60260 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.84□□□□□ -2.11
PRKNO60260 AC002984.1-201ENST00000591692 448 ntBASIC1.84□□□□□ -2.11
PRKNO60260 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
PRKNO60260 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.84□□□□□ -2.11
PRKNO60260 AP001282.2-201ENST00000616149 309 ntBASIC1.84□□□□□ -2.11
PRKNO60260 AC010615.1-201ENST00000594254 1764 ntBASIC1.84□□□□□ -2.12
PRKNO60260 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
PRKNO60260 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.84□□□□□ -2.12
PRKNO60260 Y_RNA.237-201ENST00000364439 102 ntBASIC1.83□□□□□ -2.12
PRKNO60260 Y_RNA.243-201ENST00000364481 109 ntBASIC1.83□□□□□ -2.12
PRKNO60260 Y_RNA.329-201ENST00000365209 107 ntBASIC1.83□□□□□ -2.12
PRKNO60260 Y_RNA.562-201ENST00000384695 113 ntBASIC1.83□□□□□ -2.12
PRKNO60260 Y_RNA.569-201ENST00000384749 103 ntBASIC1.83□□□□□ -2.12
PRKNO60260 AL031003.1-201ENST00000404229 172 ntBASIC1.83□□□□□ -2.12
PRKNO60260 AL355796.1-201ENST00000406706 323 ntBASIC1.83□□□□□ -2.12
PRKNO60260 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
PRKNO60260 MIR1253-201ENST00000408273 105 ntBASIC1.83□□□□□ -2.12
PRKNO60260 BX510359.4-201ENST00000423750 193 ntBASIC1.83□□□□□ -2.12
PRKNO60260 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
PRKNO60260 SNORD65B-201ENST00000459126 73 ntBASIC1.83□□□□□ -2.12
PRKNO60260 RNU6-1132P-201ENST00000459214 107 ntBASIC1.83□□□□□ -2.12
PRKNO60260 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.83□□□□□ -2.12
PRKNO60260 RNU6-436P-201ENST00000516171 114 ntBASIC1.83□□□□□ -2.12
PRKNO60260 RNU6-1041P-201ENST00000516254 102 ntBASIC1.83□□□□□ -2.12
PRKNO60260 RNU6-1338P-201ENST00000516328 91 ntBASIC1.83□□□□□ -2.12
PRKNO60260 Y_RNA.680-201ENST00000516441 93 ntBASIC1.83□□□□□ -2.12
PRKNO60260 SNORA31.25-201ENST00000517242 134 ntBASIC1.83□□□□□ -2.12
PRKNO60260 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.83□□□□□ -2.12
PRKNO60260 DEFB117-201ENST00000602356 141 ntBASIC1.83□□□□□ -2.12
PRKNO60260 AC127459.3-201ENST00000624328 466 ntBASIC1.83□□□□□ -2.12
PRKNO60260 AC092881.1-201ENST00000638218 2733 ntBASIC1.83□□□□□ -2.12
PRKNO60260 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PRKNO60260 AL391987.6-201ENST00000305671 199 ntBASIC1.82□□□□□ -2.12
PRKNO60260 Y_RNA.14-201ENST00000362415 103 ntBASIC1.82□□□□□ -2.12
PRKNO60260 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
PRKNO60260 RNA5SP493-201ENST00000364115 91 ntBASIC1.82□□□□□ -2.12
PRKNO60260 Y_RNA.350-201ENST00000365409 98 ntBASIC1.82□□□□□ -2.12
PRKNO60260 Y_RNA.447-201ENST00000384184 113 ntBASIC1.82□□□□□ -2.12
PRKNO60260 SNORA20B-201ENST00000384220 132 ntBASIC1.82□□□□□ -2.12
PRKNO60260 SNORA53-201ENST00000391141 249 ntBASIC1.82□□□□□ -2.12
PRKNO60260 RNA5SP270-201ENST00000411361 118 ntBASIC1.82□□□□□ -2.12
PRKNO60260 HMGN2P34-201ENST00000437647 269 ntBASIC1.82□□□□□ -2.12
PRKNO60260 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
PRKNO60260 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.82□□□□□ -2.12
PRKNO60260 AC011406.1-201ENST00000512440 370 ntBASIC1.82□□□□□ -2.12
PRKNO60260 RNA5SP137-201ENST00000516833 135 ntBASIC1.82□□□□□ -2.12
PRKNO60260 AP005660.1-201ENST00000522972 293 ntBASIC1.82□□□□□ -2.12
PRKNO60260 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
PRKNO60260 AC090425.1-201ENST00000610007 140 ntBASIC1.82□□□□□ -2.12
PRKNO60260 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.82□□□□□ -2.12
PRKNO60260 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PRKNO60260 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
PRKNO60260 Y_RNA.124-201ENST00000363339 93 ntBASIC1.81□□□□□ -2.12
PRKNO60260 RNU6-379P-201ENST00000363813 104 ntBASIC1.81□□□□□ -2.12
PRKNO60260 RNU6-407P-201ENST00000365280 104 ntBASIC1.81□□□□□ -2.12
PRKNO60260 Y_RNA.418-201ENST00000384029 102 ntBASIC1.81□□□□□ -2.12
PRKNO60260 Y_RNA.476-201ENST00000384347 108 ntBASIC1.81□□□□□ -2.12
PRKNO60260 MIR29C-201ENST00000385231 88 ntBASIC1.81□□□□□ -2.12
PRKNO60260 AC108059.2-201ENST00000434626 151 ntBASIC1.81□□□□□ -2.12
PRKNO60260 snoU13.23-201ENST00000458863 104 ntBASIC1.81□□□□□ -2.12
PRKNO60260 RNU1-131P-201ENST00000458943 161 ntBASIC1.81□□□□□ -2.12
PRKNO60260 AC025033.1-201ENST00000463883 194 ntBASIC1.81□□□□□ -2.12
PRKNO60260 AC010598.1-201ENST00000510378 103 ntBASIC1.81□□□□□ -2.12
PRKNO60260 MTND1P19-201ENST00000511780 315 ntBASIC1.81□□□□□ -2.12
PRKNO60260 RNU2-31P-201ENST00000516954 155 ntBASIC1.81□□□□□ -2.12
PRKNO60260 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.81□□□□□ -2.12
PRKNO60260 MIR3169-201ENST00000578032 83 ntBASIC1.81□□□□□ -2.12
PRKNO60260 MIR3684-201ENST00000579779 74 ntBASIC1.81□□□□□ -2.12
PRKNO60260 AC037487.3-201ENST00000606668 112 ntBASIC1.81□□□□□ -2.12
PRKNO60260 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.81□□□□□ -2.12
PRKNO60260 AP000553.5-201ENST00000641933 54 ntBASIC1.81□□□□□ -2.12
PRKNO60260 AP006437.1-201ENST00000641440 3685 ntBASIC1.81□□□□□ -2.12
PRKNO60260 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PRKNO60260 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
PRKNO60260 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PRKNO60260 RNU1-58P-201ENST00000362413 163 ntBASIC1.8□□□□□ -2.12
PRKNO60260 Y_RNA.60-201ENST00000362831 98 ntBASIC1.8□□□□□ -2.12
PRKNO60260 RNU4-80P-201ENST00000363200 141 ntBASIC1.8□□□□□ -2.12
PRKNO60260 RNU6-1318P-201ENST00000365389 103 ntBASIC1.8□□□□□ -2.12
PRKNO60260 RNU6-417P-201ENST00000384712 107 ntBASIC1.8□□□□□ -2.12
PRKNO60260 MIR597-201ENST00000384968 97 ntBASIC1.8□□□□□ -2.12
PRKNO60260 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms