Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SSX4O60224 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.68□□□□□ -2.14
SSX4O60224 Y_RNA.11-201ENST00000362375 109 ntBASIC1.68□□□□□ -2.14
SSX4O60224 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
SSX4O60224 SNORA22B-201ENST00000383876 138 ntBASIC1.68□□□□□ -2.14
SSX4O60224 RNA5SP109-201ENST00000391010 116 ntBASIC1.68□□□□□ -2.14
SSX4O60224 Y_RNA.645-201ENST00000391229 102 ntBASIC1.68□□□□□ -2.14
SSX4O60224 RNU2-54P-201ENST00000410299 190 ntBASIC1.68□□□□□ -2.14
SSX4O60224 AL354751.2-201ENST00000415471 210 ntBASIC1.68□□□□□ -2.14
SSX4O60224 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.68□□□□□ -2.14
SSX4O60224 RPS26P45-201ENST00000471748 340 ntBASIC1.68□□□□□ -2.14
SSX4O60224 AC097462.1-201ENST00000514125 324 ntBASIC1.68□□□□□ -2.14
SSX4O60224 Y_RNA.711-201ENST00000516993 102 ntBASIC1.68□□□□□ -2.14
SSX4O60224 AC110588.1-201ENST00000559699 137 ntBASIC1.68□□□□□ -2.14
SSX4O60224 AC020661.2-201ENST00000560114 134 ntBASIC1.68□□□□□ -2.14
SSX4O60224 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.68□□□□□ -2.14
SSX4O60224 MIR3171-201ENST00000584270 74 ntBASIC1.68□□□□□ -2.14
SSX4O60224 AC006380.1-201ENST00000603598 186 ntBASIC1.68□□□□□ -2.14
SSX4O60224 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SSX4O60224 Y_RNA.124-201ENST00000363339 93 ntBASIC1.67□□□□□ -2.14
SSX4O60224 RNU6-271P-201ENST00000363858 105 ntBASIC1.67□□□□□ -2.14
SSX4O60224 SNORD115-30-201ENST00000364117 82 ntBASIC1.67□□□□□ -2.14
SSX4O60224 Y_RNA.216-201ENST00000364205 93 ntBASIC1.67□□□□□ -2.14
SSX4O60224 Y_RNA.230-201ENST00000364348 109 ntBASIC1.67□□□□□ -2.14
SSX4O60224 RNU4-50P-201ENST00000364361 141 ntBASIC1.67□□□□□ -2.14
SSX4O60224 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
SSX4O60224 SNORA4.2-201ENST00000365313 147 ntBASIC1.67□□□□□ -2.14
SSX4O60224 Y_RNA.471-201ENST00000384312 102 ntBASIC1.67□□□□□ -2.14
SSX4O60224 RNU2-20P-201ENST00000410425 191 ntBASIC1.67□□□□□ -2.14
SSX4O60224 RNU6-1199P-201ENST00000411249 104 ntBASIC1.67□□□□□ -2.14
SSX4O60224 CYCSP49-201ENST00000420810 319 ntBASIC1.67□□□□□ -2.14
SSX4O60224 RPEP5-201ENST00000441137 268 ntBASIC1.67□□□□□ -2.14
SSX4O60224 AL606517.2-201ENST00000442855 241 ntBASIC1.67□□□□□ -2.14
SSX4O60224 SUMO1P2-201ENST00000452524 304 ntBASIC1.67□□□□□ -2.14
SSX4O60224 U8.20-201ENST00000459445 131 ntBASIC1.67□□□□□ -2.14
SSX4O60224 AL163540.1-201ENST00000485382 386 ntBASIC1.67□□□□□ -2.14
SSX4O60224 RNU6-966P-201ENST00000516479 104 ntBASIC1.67□□□□□ -2.14
SSX4O60224 RNU7-172P-201ENST00000517125 64 ntBASIC1.67□□□□□ -2.14
SSX4O60224 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SSX4O60224 RNU6-661P-201ENST00000362409 107 ntBASIC1.66□□□□□ -2.14
SSX4O60224 RNU1-22P-201ENST00000363334 158 ntBASIC1.66□□□□□ -2.14
SSX4O60224 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
SSX4O60224 Y_RNA.446-201ENST00000384178 104 ntBASIC1.66□□□□□ -2.14
SSX4O60224 MIR873-201ENST00000401120 77 ntBASIC1.66□□□□□ -2.14
SSX4O60224 RPS27P1-201ENST00000450552 247 ntBASIC1.66□□□□□ -2.14
SSX4O60224 RPL36AP21-201ENST00000490372 323 ntBASIC1.66□□□□□ -2.14
SSX4O60224 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.66□□□□□ -2.14
SSX4O60224 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX4O60224 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX4O60224 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
SSX4O60224 RNU6-155P-201ENST00000516347 100 ntBASIC1.66□□□□□ -2.14
SSX4O60224 RNU6-1153P-201ENST00000516760 105 ntBASIC1.66□□□□□ -2.14
SSX4O60224 RNA5SP481-201ENST00000516814 122 ntBASIC1.66□□□□□ -2.14
SSX4O60224 AC073413.2-201ENST00000604332 360 ntBASIC1.66□□□□□ -2.14
SSX4O60224 AC022217.4-201ENST00000604389 163 ntBASIC1.66□□□□□ -2.14
SSX4O60224 AC124312.5-201ENST00000604451 268 ntBASIC1.66□□□□□ -2.14
SSX4O60224 AL021879.1-201ENST00000611756 288 ntBASIC1.66□□□□□ -2.14
SSX4O60224 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.66□□□□□ -2.14
SSX4O60224 RNU6-450P-201ENST00000364654 107 ntBASIC1.65□□□□□ -2.15
SSX4O60224 RNU6-1175P-201ENST00000365200 107 ntBASIC1.65□□□□□ -2.15
SSX4O60224 Y_RNA.338-201ENST00000365320 114 ntBASIC1.65□□□□□ -2.15
SSX4O60224 Y_RNA.439-201ENST00000384119 94 ntBASIC1.65□□□□□ -2.15
SSX4O60224 Y_RNA.570-201ENST00000384750 101 ntBASIC1.65□□□□□ -2.15
SSX4O60224 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SSX4O60224 RNU6-360P-201ENST00000390944 104 ntBASIC1.65□□□□□ -2.15
SSX4O60224 RPL21P1-201ENST00000399532 476 ntBASIC1.65□□□□□ -2.15
SSX4O60224 MRPL42P3-201ENST00000401492 326 ntBASIC1.65□□□□□ -2.15
SSX4O60224 HSPE1P21-201ENST00000438283 308 ntBASIC1.65□□□□□ -2.15
SSX4O60224 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.65□□□□□ -2.15
SSX4O60224 MIR4423-201ENST00000580922 80 ntBASIC1.65□□□□□ -2.15
SSX4O60224 AC104695.3-201ENST00000604052 296 ntBASIC1.65□□□□□ -2.15
SSX4O60224 AC022441.3-201ENST00000605737 136 ntBASIC1.65□□□□□ -2.15
SSX4O60224 PART1_1.1-201ENST00000611761 217 ntBASIC1.65□□□□□ -2.15
SSX4O60224 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSX4O60224 Y_RNA.361-201ENST00000365515 120 ntBASIC1.64□□□□□ -2.15
SSX4O60224 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SSX4O60224 RNU6-823P-201ENST00000391042 103 ntBASIC1.64□□□□□ -2.15
SSX4O60224 AL031003.1-201ENST00000404229 172 ntBASIC1.64□□□□□ -2.15
SSX4O60224 RNU6-130P-201ENST00000411112 103 ntBASIC1.64□□□□□ -2.15
SSX4O60224 snoU13.27-201ENST00000459278 104 ntBASIC1.64□□□□□ -2.15
SSX4O60224 RPS26P55-201ENST00000471178 356 ntBASIC1.64□□□□□ -2.15
SSX4O60224 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.64□□□□□ -2.15
SSX4O60224 AC022616.4-201ENST00000522985 181 ntBASIC1.64□□□□□ -2.15
SSX4O60224 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.64□□□□□ -2.15
SSX4O60224 AC024614.2-201ENST00000577584 372 ntBASIC1.64□□□□□ -2.15
SSX4O60224 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.64□□□□□ -2.15
SSX4O60224 AP000942.3-201ENST00000603702 160 ntBASIC1.64□□□□□ -2.15
SSX4O60224 AC018630.2-201ENST00000534866 2403 ntBASIC1.64□□□□□ -2.15
SSX4O60224 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.63□□□□□ -2.15
SSX4O60224 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SSX4O60224 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SSX4O60224 SNORD114-7-201ENST00000362520 77 ntBASIC1.63□□□□□ -2.15
SSX4O60224 Y_RNA.143-201ENST00000363520 106 ntBASIC1.63□□□□□ -2.15
SSX4O60224 RNU6-414P-201ENST00000363705 104 ntBASIC1.63□□□□□ -2.15
SSX4O60224 RNU6-324P-201ENST00000363957 106 ntBASIC1.63□□□□□ -2.15
SSX4O60224 Y_RNA.389-201ENST00000383924 113 ntBASIC1.63□□□□□ -2.15
SSX4O60224 Y_RNA.462-201ENST00000384268 102 ntBASIC1.63□□□□□ -2.15
SSX4O60224 Y_RNA.551-201ENST00000384661 102 ntBASIC1.63□□□□□ -2.15
SSX4O60224 RNU5A-5P-201ENST00000411054 116 ntBASIC1.63□□□□□ -2.15
SSX4O60224 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms