Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL355297.2-201ENST00000604792 129 ntBASIC2.48□□□□□ -2.01
PROM1O43490 AC013791.1-201ENST00000616619 62 ntBASIC2.48□□□□□ -2.01
PROM1O43490 U6.106-201ENST00000636360 105 ntBASIC2.48□□□□□ -2.01
PROM1O43490 ZNF271P-202ENST00000465539 1970 ntBASIC2.48□□□□□ -2.01
PROM1O43490 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.48□□□□□ -2.01
PROM1O43490 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PROM1O43490 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PROM1O43490 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PROM1O43490 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PROM1O43490 Y_RNA.8-201ENST00000362353 102 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNA5SP240-201ENST00000365355 128 ntBASIC2.47□□□□□ -2.01
PROM1O43490 Y_RNA.368-201ENST00000365547 113 ntBASIC2.47□□□□□ -2.01
PROM1O43490 Y_RNA.571-201ENST00000384753 98 ntBASIC2.47□□□□□ -2.01
PROM1O43490 AL355796.1-201ENST00000406706 323 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNU2-2P-201ENST00000410396 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.47□□□□□ -2.01
PROM1O43490 CR769767.1-201ENST00000436337 346 ntBASIC2.47□□□□□ -2.01
PROM1O43490 AC016925.1-201ENST00000458303 298 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNU6-221P-201ENST00000459541 99 ntBASIC2.47□□□□□ -2.01
PROM1O43490 UBL5P3-201ENST00000475112 231 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNU1-41P-201ENST00000516161 162 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNA5SP282-201ENST00000516355 108 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNU6-948P-201ENST00000516374 107 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNU1-48P-201ENST00000516400 162 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNU2-4P-201ENST00000606190 192 ntBASIC2.47□□□□□ -2.01
PROM1O43490 AC104465.1-201ENST00000611365 139 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.15-201ENST00000611544 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.16-201ENST00000613119 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.12-201ENST00000613778 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.9-201ENST00000615427 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 AL078604.3-201ENST00000615580 211 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.11-201ENST00000616345 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.2-201ENST00000616535 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.3-201ENST00000617785 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.19-201ENST00000618602 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RNU2-1-201ENST00000618664 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 AL590808.1-201ENST00000618696 141 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.6-201ENST00000619225 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.5-201ENST00000619465 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 U2.10-201ENST00000620268 191 ntBASIC2.47□□□□□ -2.01
PROM1O43490 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PROM1O43490 MIR203B-201ENST00000636080 86 ntBASIC2.47□□□□□ -2.01
PROM1O43490 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.47□□□□□ -2.01
PROM1O43490 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PROM1O43490 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PROM1O43490 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
PROM1O43490 Y_RNA.7-201ENST00000362352 102 ntBASIC2.46□□□□□ -2.02
PROM1O43490 RNU6-859P-201ENST00000362728 107 ntBASIC2.46□□□□□ -2.02
PROM1O43490 RNU6-899P-201ENST00000363947 107 ntBASIC2.46□□□□□ -2.02
PROM1O43490 RNU4-10P-201ENST00000364383 140 ntBASIC2.46□□□□□ -2.02
PROM1O43490 Y_RNA.240-201ENST00000364469 95 ntBASIC2.46□□□□□ -2.02
PROM1O43490 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
PROM1O43490 MIR873-201ENST00000401120 77 ntBASIC2.46□□□□□ -2.02
PROM1O43490 AL513328.1-201ENST00000446460 224 ntBASIC2.46□□□□□ -2.02
PROM1O43490 SNORD65B-201ENST00000459126 73 ntBASIC2.46□□□□□ -2.02
PROM1O43490 AC091021.1-201ENST00000468051 388 ntBASIC2.46□□□□□ -2.02
PROM1O43490 AC010409.1-201ENST00000487382 476 ntBASIC2.46□□□□□ -2.02
PROM1O43490 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.46□□□□□ -2.02
PROM1O43490 AC008413.1-201ENST00000511864 177 ntBASIC2.46□□□□□ -2.02
PROM1O43490 AC100767.1-201ENST00000528178 123 ntBASIC2.46□□□□□ -2.02
PROM1O43490 MRPS18CP4-201ENST00000535821 231 ntBASIC2.46□□□□□ -2.02
PROM1O43490 MIR3133-201ENST00000583157 78 ntBASIC2.46□□□□□ -2.02
PROM1O43490 MIR7843-201ENST00000622274 79 ntBASIC2.46□□□□□ -2.02
PROM1O43490 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.45□□□□□ -2.02
PROM1O43490 RNU6-271P-201ENST00000363858 105 ntBASIC2.45□□□□□ -2.02
PROM1O43490 Y_RNA.310-201ENST00000365063 113 ntBASIC2.45□□□□□ -2.02
PROM1O43490 Y_RNA.361-201ENST00000365515 120 ntBASIC2.45□□□□□ -2.02
PROM1O43490 Y_RNA.435-201ENST00000384095 112 ntBASIC2.45□□□□□ -2.02
PROM1O43490 RNA5SP210-201ENST00000391034 120 ntBASIC2.45□□□□□ -2.02
PROM1O43490 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.45□□□□□ -2.02
PROM1O43490 RPL23AP7-203ENST00000449021 469 ntBASIC2.45□□□□□ -2.02
PROM1O43490 RNU7-141P-201ENST00000459304 62 ntBASIC2.45□□□□□ -2.02
PROM1O43490 AC010598.1-201ENST00000510378 103 ntBASIC2.45□□□□□ -2.02
PROM1O43490 RNU6-991P-201ENST00000516168 107 ntBASIC2.45□□□□□ -2.02
PROM1O43490 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.45□□□□□ -2.02
PROM1O43490 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
PROM1O43490 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
PROM1O43490 AC021753.1-201ENST00000635724 168 ntBASIC2.45□□□□□ -2.02
PROM1O43490 AC068647.2-201ENST00000637380 353 ntBASIC2.45□□□□□ -2.02
PROM1O43490 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PROM1O43490 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.45□□□□□ -2.02
PROM1O43490 SNORA27.1-201ENST00000362604 124 ntBASIC2.44□□□□□ -2.02
PROM1O43490 RNU6-1205P-201ENST00000363625 106 ntBASIC2.44□□□□□ -2.02
PROM1O43490 Y_RNA.172-201ENST00000363765 102 ntBASIC2.44□□□□□ -2.02
PROM1O43490 Y_RNA.182-201ENST00000363880 111 ntBASIC2.44□□□□□ -2.02
PROM1O43490 Y_RNA.238-201ENST00000364441 102 ntBASIC2.44□□□□□ -2.02
PROM1O43490 RNU6-746P-201ENST00000384112 109 ntBASIC2.44□□□□□ -2.02
PROM1O43490 RNU6-1235P-201ENST00000384559 107 ntBASIC2.44□□□□□ -2.02
PROM1O43490 SNORA8.3-201ENST00000384679 139 ntBASIC2.44□□□□□ -2.02
PROM1O43490 MIR518C-201ENST00000384822 101 ntBASIC2.44□□□□□ -2.02
PROM1O43490 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
PROM1O43490 AC008134.1-201ENST00000420943 193 ntBASIC2.44□□□□□ -2.02
PROM1O43490 RNU6-498P-201ENST00000459468 107 ntBASIC2.44□□□□□ -2.02
PROM1O43490 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.44□□□□□ -2.02
PROM1O43490 RNU6-1337P-201ENST00000516525 95 ntBASIC2.44□□□□□ -2.02
PROM1O43490 SNORA48.11-201ENST00000517015 89 ntBASIC2.44□□□□□ -2.02
PROM1O43490 SUMO2P18-201ENST00000518873 252 ntBASIC2.44□□□□□ -2.02
PROM1O43490 AC021269.2-201ENST00000532318 330 ntBASIC2.44□□□□□ -2.02
PROM1O43490 PRELID2P1-201ENST00000552837 301 ntBASIC2.44□□□□□ -2.02
PROM1O43490 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms