Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNY3P3-201ENST00000363816 102 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 RNU6-595P-201ENST00000363944 107 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 Y_RNA.414-201ENST00000384011 101 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 Y_RNA.490-201ENST00000384413 102 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 RNU1-139P-201ENST00000391307 165 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.68□□□□□ -2.3
CLOCKO15516 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 MTND3P23-201ENST00000431980 347 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.68□□□□□ -2.3
CLOCKO15516 AC245047.8-201ENST00000456455 284 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 RNU6-1132P-201ENST00000459214 107 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.68□□□□□ -2.3
CLOCKO15516 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.68□□□□□ -2.3
CLOCKO15516 AC018710.1-201ENST00000506509 158 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 AC046134.1-201ENST00000514454 666 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 RNA5SP20-201ENST00000515976 84 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 RNA5SP436-201ENST00000516020 115 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 RNA5SP255-201ENST00000516370 107 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 ZNF299P-201ENST00000406845 1804 ntBASIC0.68□□□□□ -2.3
CLOCKO15516 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
CLOCKO15516 SNORA27.1-201ENST00000362604 124 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 RNU6-451P-201ENST00000362921 107 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 RNU6-407P-201ENST00000365280 104 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 RNU6-1264P-201ENST00000383891 107 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 Y_RNA.466-201ENST00000384294 113 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 SNORD116-13-201ENST00000384408 92 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 RNU6-376P-201ENST00000384731 106 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 SNORA75.2-201ENST00000391138 150 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 RNU6-332P-201ENST00000391193 108 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 SNORA75.3-201ENST00000391231 150 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 AC018865.2-201ENST00000423631 129 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 Y_RNA.670-201ENST00000516255 105 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.67□□□□□ -2.3
CLOCKO15516 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.67□□□□□ -2.3
CLOCKO15516 AC093023.1-201ENST00000547375 507 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 AL096861.1-201ENST00000610899 123 ntBASIC0.67□□□□□ -2.3
CLOCKO15516 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CLOCKO15516 RNA5SP361-201ENST00000362686 118 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 Y_RNA.112-201ENST00000363250 102 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 RNU6-306P-201ENST00000384617 107 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 USP9YP16-201ENST00000430287 407 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 RPEP5-201ENST00000441137 268 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.66□□□□□ -2.3
CLOCKO15516 USP9YP23-201ENST00000455085 407 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 AL049830.1-201ENST00000468034 425 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 SNORA70.12-201ENST00000516084 153 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 AL391903.3-201ENST00000612158 163 ntBASIC0.66□□□□□ -2.3
CLOCKO15516 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.66□□□□□ -2.3
CLOCKO15516 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.66□□□□□ -2.3
CLOCKO15516 Y_RNA.38-201ENST00000362617 102 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 FABP5P4-201ENST00000437203 171 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 AL137792.2-201ENST00000443484 235 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.65□□□□□ -2.31
CLOCKO15516 RNU6-1278P-201ENST00000516130 107 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 RNU6-1291P-201ENST00000516591 104 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 Y_RNA.706-201ENST00000516933 99 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 AL358944.1-201ENST00000528537 144 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.65□□□□□ -2.31
CLOCKO15516 AC090617.3-201ENST00000573670 475 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 AC100812.1-201ENST00000607622 580 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CLOCKO15516 PVT1_3.1-201ENST00000620853 95 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 MIR1321-201ENST00000637766 79 ntBASIC0.65□□□□□ -2.31
CLOCKO15516 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
CLOCKO15516 RNU6-222P-201ENST00000362438 107 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 RNU6-833P-201ENST00000363486 107 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 RNU1-133P-201ENST00000364867 167 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.64□□□□□ -2.31
CLOCKO15516 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 MIR891A-201ENST00000401237 79 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 RNU5A-5P-201ENST00000411054 116 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 Z98949.2-201ENST00000440996 144 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 AC117454.1-201ENST00000491120 168 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 SNORD111.1-201ENST00000516421 86 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.64□□□□□ -2.31
CLOCKO15516 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 AC073544.1-201ENST00000600110 1595 ntBASIC0.64□□□□□ -2.31
CLOCKO15516 Y_RNA.106-201ENST00000363189 100 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 RNU6-1105P-201ENST00000384774 107 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 MIR526A1-201ENST00000384897 85 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 MIR520G-201ENST00000385064 90 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 RNU6-1001P-201ENST00000411265 100 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 ELOCP21-201ENST00000412558 336 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.63□□□□□ -2.31
CLOCKO15516 MTND1P1-201ENST00000445453 368 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 UQCRBP2-201ENST00000447827 297 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 snoU13.25-201ENST00000458945 104 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 RNA5SP480-201ENST00000516840 109 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 AC127459.3-201ENST00000624328 466 ntBASIC0.63□□□□□ -2.31
CLOCKO15516 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.63□□□□□ -2.31
CLOCKO15516 RNU4-41P-201ENST00000364426 143 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 RNU6-342P-201ENST00000384521 104 ntBASIC0.62□□□□□ -2.31
CLOCKO15516 MIR329-1-201ENST00000385028 80 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms