Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 SNORD68-201ENST00000363214 84 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 SNORD114-11-201ENST00000363738 75 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 SNORA25.7-201ENST00000364375 127 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 U8.5-201ENST00000364528 136 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 AL022718.1-201ENST00000412004 84 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.95□□□□□ -2.56
HMGN4O00479 RNU6-334P-201ENST00000517072 102 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 MTND3P13-201ENST00000574391 343 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.95□□□□□ -2.56
HMGN4O00479 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.95□□□□□ -2.56
HMGN4O00479 AF250324.2-201ENST00000608299 610 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 AL139418.1-201ENST00000613613 177 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 uc_338.22-201ENST00000622722 187 ntBASIC-0.95□□□□□ -2.56
HMGN4O00479 RNU6-433P-201ENST00000363216 104 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 RNU6-873P-201ENST00000363833 107 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 RNU6-715P-201ENST00000365204 103 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 MTCYBP36-201ENST00000404146 440 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 RNU4-63P-201ENST00000411313 118 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 AL390729.2-201ENST00000416137 156 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 SNORA18.4-201ENST00000516440 124 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 AC018448.1-201ENST00000552843 316 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 AC090617.3-201ENST00000573670 475 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 MIR548AR-201ENST00000582191 57 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 MIR4762-201ENST00000585261 75 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 MIR4436A-201ENST00000585278 85 ntBASIC-0.96□□□□□ -2.56
HMGN4O00479 RNU6-179P-201ENST00000363350 107 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 SNORD87-201ENST00000364849 89 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 RNU6-376P-201ENST00000384731 106 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 RPL21P38-201ENST00000418090 167 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 AC109327.2-201ENST00000448339 378 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.97□□□□□ -2.56
HMGN4O00479 RNA5SP47-201ENST00000517230 109 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 MTND1P5-201ENST00000517906 940 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.97□□□□□ -2.56
HMGN4O00479 AC006380.1-201ENST00000603598 186 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 AC137590.2-201ENST00000619709 240 ntBASIC-0.97□□□□□ -2.56
HMGN4O00479 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 RNU6-125P-201ENST00000384505 107 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 SNORD28B-201ENST00000390993 75 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 AL365184.2-201ENST00000431139 435 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 MIR18B-201ENST00000454574 71 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 RNU7-62P-201ENST00000458856 62 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 MTCO2P6-201ENST00000463134 685 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 MTCO2P29-201ENST00000465212 189 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 AC046134.1-201ENST00000514454 666 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 RNU6-758P-201ENST00000516292 89 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 AC016597.2-201ENST00000613256 341 ntBASIC-0.98□□□□□ -2.57
HMGN4O00479 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 RNU6-811P-201ENST00000384069 107 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 RNU7-185P-201ENST00000459215 60 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 SNORA25.17-201ENST00000517184 124 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 MTATP6P15-201ENST00000527233 835 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.99□□□□□ -2.57
HMGN4O00479 NAMPTP3-201ENST00000569273 224 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.99□□□□□ -2.57
HMGN4O00479 MIR3925-201ENST00000584674 77 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 uc_338.4-201ENST00000616635 176 ntBASIC-0.99□□□□□ -2.57
HMGN4O00479 Y_RNA.22-201ENST00000362492 102 ntBASIC-1□□□□□ -2.57
HMGN4O00479 SNORD114-14-201ENST00000362723 75 ntBASIC-1□□□□□ -2.57
HMGN4O00479 SNORD115-7-201ENST00000365306 82 ntBASIC-1□□□□□ -2.57
HMGN4O00479 RNU6-245P-201ENST00000384020 107 ntBASIC-1□□□□□ -2.57
HMGN4O00479 SNORA75.1-201ENST00000391130 148 ntBASIC-1□□□□□ -2.57
HMGN4O00479 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1□□□□□ -2.57
HMGN4O00479 Z95118.1-201ENST00000421372 247 ntBASIC-1□□□□□ -2.57
HMGN4O00479 EPS15P1-201ENST00000448836 336 ntBASIC-1□□□□□ -2.57
HMGN4O00479 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1□□□□□ -2.57
HMGN4O00479 AC116353.2-201ENST00000505332 712 ntBASIC-1□□□□□ -2.57
HMGN4O00479 PRDX4P1-201ENST00000507189 574 ntBASIC-1□□□□□ -2.57
HMGN4O00479 AC079140.5-201ENST00000507882 310 ntBASIC-1□□□□□ -2.57
HMGN4O00479 RNU6-135P-201ENST00000516769 101 ntBASIC-1□□□□□ -2.57
HMGN4O00479 AP001328.1-201ENST00000528550 176 ntBASIC-1□□□□□ -2.57
HMGN4O00479 AC121247.2-201ENST00000604776 136 ntBASIC-1□□□□□ -2.57
HMGN4O00479 AC108676.2-201ENST00000605225 163 ntBASIC-1□□□□□ -2.57
HMGN4O00479 AL590491.3-201ENST00000610731 82 ntBASIC-1□□□□□ -2.57
HMGN4O00479 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 SNORA63C-201ENST00000364578 129 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 MIR1257-201ENST00000408490 117 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 MTCO1P20-201ENST00000425366 358 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 AC092447.3-201ENST00000426027 686 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 MTCO2P11-201ENST00000431069 680 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.01□□□□□ -2.57
HMGN4O00479 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.01□□□□□ -2.57
HMGN4O00479 AC116562.3-201ENST00000506136 177 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 AC006600.1-201ENST00000572529 153 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.01□□□□□ -2.57
HMGN4O00479 MIR4636-201ENST00000582271 80 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 AC087685.1-201ENST00000587507 141 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 AC125232.2-201ENST00000592457 143 ntBASIC-1.01□□□□□ -2.57
HMGN4O00479 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.01□□□□□ -2.57
HMGN4O00479 RNU6-227P-201ENST00000362865 103 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 RNU4-1-201ENST00000363925 141 ntBASIC-1.02□□□□□ -2.57
HMGN4O00479 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms