Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.63□□□□□ -2.31
AP3B1O00203 RNU6-1264P-201ENST00000383891 107 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 Y_RNA.490-201ENST00000384413 102 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 MIR526A1-201ENST00000384897 85 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 MTCYBP4-201ENST00000401524 249 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 USP9YP16-201ENST00000430287 407 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 USP9YP23-201ENST00000455085 407 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 SNORD111.1-201ENST00000516421 86 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.63□□□□□ -2.31
AP3B1O00203 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 AC025627.3-201ENST00000582078 182 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 FAM106DP-201ENST00000586416 501 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 AC022079.1-201ENST00000621546 602 ntBASIC0.63□□□□□ -2.31
AP3B1O00203 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
AP3B1O00203 RNU5A-5P-201ENST00000411054 116 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 RNU6-1001P-201ENST00000411265 100 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 ELOCP21-201ENST00000412558 336 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.62□□□□□ -2.31
AP3B1O00203 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.62□□□□□ -2.31
AP3B1O00203 Z98949.2-201ENST00000440996 144 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 AL137792.2-201ENST00000443484 235 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.62□□□□□ -2.31
AP3B1O00203 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.62□□□□□ -2.31
AP3B1O00203 Y_RNA.706-201ENST00000516933 99 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 MIR3942-201ENST00000585264 109 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 MIR1321-201ENST00000637766 79 ntBASIC0.62□□□□□ -2.31
AP3B1O00203 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
AP3B1O00203 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
AP3B1O00203 Y_RNA.48-201ENST00000362710 103 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 RNU6-833P-201ENST00000363486 107 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 RNU4-41P-201ENST00000364426 143 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 RNU6-163P-201ENST00000384396 106 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 MIR520E-201ENST00000384867 87 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 MIR329-1-201ENST00000385028 80 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 RNU6-1278P-201ENST00000516130 107 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 CYP3A137P-201ENST00000562436 69 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 MIR3192-201ENST00000584920 77 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 AC125232.2-201ENST00000592457 143 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 AC100812.1-201ENST00000607622 580 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 AC073544.1-201ENST00000600110 1595 ntBASIC0.61□□□□□ -2.31
AP3B1O00203 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
AP3B1O00203 Y_RNA.106-201ENST00000363189 100 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 RNU6-1090P-201ENST00000364065 94 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 RNU6-117P-201ENST00000365415 107 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 SNORD114-22-201ENST00000365423 72 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 MIR891A-201ENST00000401237 79 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
AP3B1O00203 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 MTATP6P17-201ENST00000431030 672 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 UQCRBP2-201ENST00000447827 297 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 AC022868.1-201ENST00000517767 391 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.6□□□□□ -2.31
AP3B1O00203 DEFB108E-201ENST00000524692 240 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 AL358944.1-201ENST00000528537 144 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 AC011604.1-201ENST00000545978 196 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 AC090617.3-201ENST00000573670 475 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 MIR6504-201ENST00000613520 61 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 AL357075.2-201ENST00000614906 189 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 MIR8070-201ENST00000616510 88 ntBASIC0.6□□□□□ -2.31
AP3B1O00203 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.6□□□□□ -2.31
AP3B1O00203 MTND5P16-201ENST00000460269 1703 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 Y_RNA.51-201ENST00000362725 102 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 Y_RNA.336-201ENST00000365307 109 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 RNU6-1335P-201ENST00000365426 107 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 MIR520G-201ENST00000385064 90 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 RNU2-16P-201ENST00000410712 136 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 EIF1P2-201ENST00000428233 350 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 AC093019.1-201ENST00000443135 252 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 MTND1P1-201ENST00000445453 368 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.59□□□□□ -2.31
AP3B1O00203 AC090617.10-201ENST00000624308 134 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 AC127459.3-201ENST00000624328 466 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 U6.115-201ENST00000636045 103 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 AC024614.3-201ENST00000637860 256 ntBASIC0.59□□□□□ -2.31
AP3B1O00203 Y_RNA.4-201ENST00000362333 112 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 SNORD116-1-201ENST00000384335 95 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 RNU6-136P-201ENST00000384663 107 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.58□□□□□ -2.32
AP3B1O00203 USP9YP30-201ENST00000430729 455 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC233266.1-201ENST00000454518 96 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 U7.7-201ENST00000459276 60 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC098869.1-201ENST00000481627 292 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.58□□□□□ -2.32
AP3B1O00203 RNU6-1096P-201ENST00000517089 102 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC026407.1-201ENST00000518369 204 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.58□□□□□ -2.32
AP3B1O00203 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.58□□□□□ -2.32
AP3B1O00203 Z83818.1-201ENST00000603584 150 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC242852.1-201ENST00000612151 96 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.58□□□□□ -2.32
AP3B1O00203 AC244015.1-201ENST00000622301 99 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms