Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SPDYE4A6NLX3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SPDYE4A6NLX3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 RNU6-862P-201ENST00000362804 105 ntBASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 RNU6-160P-201ENST00000384591 107 ntBASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 RNU7-45P-201ENST00000459460 63 ntBASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 AC108729.3-201ENST00000513484 108 ntBASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 ELOCP29-201ENST00000588193 334 ntBASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.96□□□□□ -1.62
SPDYE4A6NLX3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 Y_RNA.191-201ENST00000363972 113 ntBASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 RPS12P10-201ENST00000427031 377 ntBASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 CYP4A43P-201ENST00000568156 121 ntBASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 AC006130.2-201ENST00000586202 326 ntBASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SPDYE4A6NLX3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 Y_RNA.470-201ENST00000384307 117 ntBASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 RPL23AP48-201ENST00000406913 488 ntBASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 AC069257.2-201ENST00000441819 155 ntBASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 RPS26P15-201ENST00000488067 348 ntBASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 RNA5SP497-201ENST00000516081 97 ntBASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 AC093249.4-201ENST00000564755 259 ntBASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 AC027279.3-201ENST00000625055 122 ntBASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 AC245060.5-201ENST00000610778 3293 ntBASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SPDYE4A6NLX3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 SNORA22.1-201ENST00000362701 134 ntBASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 RNA5SP151-201ENST00000365632 117 ntBASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 U3.44-201ENST00000458938 192 ntBASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 SNORD59.2-201ENST00000516873 68 ntBASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 MIR2116-201ENST00000517221 80 ntBASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 MIR4727-201ENST00000622232 55 ntBASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SPDYE4A6NLX3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 SNORA68.1-201ENST00000364537 132 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 SNORA57.1-201ENST00000391227 145 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 Z92545.1-201ENST00000411782 234 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 AC015922.2-201ENST00000435593 184 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 AL606517.2-201ENST00000442855 241 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 STAG3L5P-204ENST00000443759 179 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 AC018868.1-201ENST00000491307 315 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 RNU7-181P-201ENST00000517234 74 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 RNU6-1116P-201ENST00000517269 99 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 SNORA28-201ENST00000606769 126 ntBASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPDYE4A6NLX3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 RNU6-633P-201ENST00000362612 103 ntBASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 MIR1270-201ENST00000459320 83 ntBASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 AC007224.1-201ENST00000564410 144 ntBASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 MIR376B-201ENST00000614515 100 ntBASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 AL138721.1-201ENST00000616756 179 ntBASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPDYE4A6NLX3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.9□□□□□ -1.62
SPDYE4A6NLX3 SNORA70.7-201ENST00000384159 133 ntBASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 SNORA70C-201ENST00000384538 135 ntBASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 RNA5SP261-201ENST00000410536 106 ntBASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 RNA5SP306-201ENST00000411087 107 ntBASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 AL162151.2-201ENST00000448875 158 ntBASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SPDYE4A6NLX3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.89□□□□□ -1.63
SPDYE4A6NLX3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms