Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RPL17P51-201ENST00000605218 238 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.812-201ENST00000610788 101 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.784-201ENST00000613803 101 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.787-201ENST00000616522 101 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.780-201ENST00000617336 101 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.801-201ENST00000619005 101 ntBASIC1.61□□□□□ -2.15
TRIM49BA6NDI0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 MIR424-201ENST00000362227 98 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.27-201ENST00000362540 103 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.202-201ENST00000364083 110 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 RNU6-280P-201ENST00000364145 104 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 SNORD14.1-201ENST00000365609 90 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 MIR215-201ENST00000384858 110 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 RPL23AP36-201ENST00000413895 458 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 AC060773.1-201ENST00000421698 310 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 RNU6-625P-201ENST00000459412 107 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 RNU7-57P-201ENST00000459540 60 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 AC025465.3-201ENST00000510570 311 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 AC067942.3-201ENST00000512025 362 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 SNORA40.14-201ENST00000516543 86 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 SNORA31.17-201ENST00000516953 127 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 AC131281.1-201ENST00000522984 164 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 SUB1P4-201ENST00000566062 339 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 MIR4303-201ENST00000581299 66 ntBASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.6□□□□□ -2.15
TRIM49BA6NDI0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU1-62P-201ENST00000362599 164 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.64-201ENST00000362845 102 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU1-42P-201ENST00000364033 160 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.222-201ENST00000364264 102 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU6-60P-201ENST00000364792 103 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU6-20P-201ENST00000384106 107 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.455-201ENST00000384230 98 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU6-975P-201ENST00000384296 105 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU6-1160P-201ENST00000384546 104 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 SNORD78.2-201ENST00000391076 69 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 BTF3P4-201ENST00000418852 495 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 RNU6-764P-201ENST00000516396 105 ntBASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
TRIM49BA6NDI0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 MIR378A-201ENST00000362177 66 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 RNU6-137P-201ENST00000363680 108 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.214-201ENST00000364201 112 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 RNU6-738P-201ENST00000384531 106 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 MIR586-201ENST00000385035 97 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 RNU6-985P-201ENST00000410182 104 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 RNU6-1199P-201ENST00000411249 104 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 AC099677.2-201ENST00000436385 175 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 AC005002.2-201ENST00000438228 269 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 PCNPP5-201ENST00000452246 481 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 RNU6-897P-201ENST00000517135 105 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 MIR5094-201ENST00000578766 85 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 MIR3145-201ENST00000580727 82 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 MIR4753-201ENST00000585119 83 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 AC008737.2-201ENST00000599446 118 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 AL390123.1-201ENST00000603216 237 ntBASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.4-201ENST00000362333 112 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 RNU6-626P-201ENST00000363354 107 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 RNU6-414P-201ENST00000363705 104 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.424-201ENST00000384063 103 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 RNU6-639P-201ENST00000384074 107 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 RNU6-574P-201ENST00000384265 107 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 AL355796.1-201ENST00000406706 323 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 EBAG9P1-201ENST00000418955 543 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 FCF1P4-201ENST00000448326 183 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 snoU13.9-201ENST00000458927 103 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 MRPS35P2-201ENST00000508242 191 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 AC108729.3-201ENST00000513484 108 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 RNU6-911P-201ENST00000516523 104 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 MIR4719-201ENST00000585233 84 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 AC004467.1-201ENST00000615678 330 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.57□□□□□ -2.16
TRIM49BA6NDI0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 SNORD81.1-201ENST00000363064 77 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 RNU6-338P-201ENST00000383888 105 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.498-201ENST00000384460 102 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 SNORA67.5-201ENST00000391036 107 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms