Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 SNORD65B-201ENST00000459126 73 ntBASIC2.65□□□□□ -1.99
PCDHGA2Q9Y5H1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.65□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU6-111P-201ENST00000517179 105 ntBASIC2.65□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR3145-201ENST00000580727 82 ntBASIC2.65□□□□□ -1.99
PCDHGA2Q9Y5H1 AL512605.2-201ENST00000592972 256 ntBASIC2.65□□□□□ -1.99
PCDHGA2Q9Y5H1 AC090425.1-201ENST00000610007 140 ntBASIC2.65□□□□□ -1.99
PCDHGA2Q9Y5H1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
PCDHGA2Q9Y5H1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 RNA5SP289-201ENST00000362332 137 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU4-80P-201ENST00000363200 141 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.238-201ENST00000364441 102 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 AL355796.1-201ENST00000406706 323 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR1253-201ENST00000408273 105 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR1289-2-201ENST00000408360 111 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 AC003982.1-202ENST00000469928 248 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 RN7SL636P-201ENST00000497504 294 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 SUMO2P18-201ENST00000518873 252 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 RPL21P9-201ENST00000556149 474 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 AL031274.2-201ENST00000599419 203 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 AC078938.1-201ENST00000620993 318 ntBASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PCDHGA2Q9Y5H1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 SNORA20B-201ENST00000384220 132 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR1262-201ENST00000408276 93 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 RNA5SP247-201ENST00000411181 105 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 AL353689.1-201ENST00000438895 199 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 RPS27AP9-201ENST00000477681 438 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR4643-201ENST00000577473 78 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 AL162424.1-201ENST00000602325 221 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 AC010297.1-201ENST00000623948 149 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PCDHGA2Q9Y5H1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 RNY1-201ENST00000364228 113 ntBASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU6-740P-201ENST00000364734 105 ntBASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU6-338P-201ENST00000383888 105 ntBASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR27B-201ENST00000385129 97 ntBASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR873-201ENST00000401120 77 ntBASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 AC016909.1-201ENST00000415916 166 ntBASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU4-71P-201ENST00000516258 113 ntBASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 SNORA31.15-201ENST00000516771 132 ntBASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.62□□□□□ -1.99
PCDHGA2Q9Y5H1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 SNORA27.1-201ENST00000362604 124 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.82-201ENST00000363000 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.92-201ENST00000363043 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.217-201ENST00000364214 105 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.235-201ENST00000364412 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.306-201ENST00000365015 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.312-201ENST00000365089 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.322-201ENST00000365151 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.515-201ENST00000384535 112 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU11-5P-201ENST00000391216 129 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 RPL23AP7-203ENST00000449021 469 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 AL139109.1-201ENST00000455491 297 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.650-201ENST00000459002 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.641-201ENST00000459414 105 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.777-201ENST00000516982 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.771-201ENST00000598668 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.789-201ENST00000622480 102 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
PCDHGA2Q9Y5H1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 Y_RNA.65-201ENST00000362846 100 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 RNA5SP270-201ENST00000411361 118 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 HMGN2P3-201ENST00000433603 273 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 HMGN2P5-201ENST00000436882 273 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 HSPE1P13-201ENST00000451143 297 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 RNA5SP320-201ENST00000516263 124 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 RNU1-104P-201ENST00000517280 175 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 AL137100.2-201ENST00000555786 315 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR1273D-201ENST00000577266 86 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR3668-201ENST00000582138 75 ntBASIC2.6□□□□□ -1.99
PCDHGA2Q9Y5H1 MIR4282-201ENST00000583613 67 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms