Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHB1Q9Y5F3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 U8.2-201ENST00000363156 134 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AL031003.1-201ENST00000404229 172 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 RNU6-710P-201ENST00000410424 105 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AL138752.1-201ENST00000452964 351 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AC010598.1-201ENST00000510378 103 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AC025647.1-201ENST00000517879 253 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 DEFB117-201ENST00000602356 141 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AC005828.6-201ENST00000606610 232 ntBASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHB1Q9Y5F3 AP006437.1-201ENST00000641440 3685 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 RNU6-682P-201ENST00000363843 106 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 RNU6-271P-201ENST00000363858 105 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 RNU6-923P-201ENST00000364753 107 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 SNORA3.2-201ENST00000408221 125 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 RNU2-61P-201ENST00000411069 191 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 snoU13.26-201ENST00000459452 105 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 UBL5P3-201ENST00000475112 231 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 RNU6-237P-201ENST00000515985 71 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.679-201ENST00000516416 91 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 SNORA27.4-201ENST00000516650 95 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 RNU6-861P-201ENST00000516745 106 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 RNU6-255P-201ENST00000516957 105 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 AP002392.1-201ENST00000537692 208 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 MIR4282-201ENST00000583613 67 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 AC006435.5-201ENST00000624486 112 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
PCDHB1Q9Y5F3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 RNU6-443P-201ENST00000384780 107 ntBASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 RNU1-131P-201ENST00000458943 161 ntBASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 SNORD65B-201ENST00000459126 73 ntBASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 RNU6-856P-201ENST00000516959 98 ntBASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.57□□□□□ -2
PCDHB1Q9Y5F3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 UBE2WP1-201ENST00000362030 340 ntBASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 RNU6-160P-201ENST00000384591 107 ntBASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 RNU6-191P-201ENST00000516295 94 ntBASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHB1Q9Y5F3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 RNA5SP289-201ENST00000362332 137 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 RNU6-187P-201ENST00000384139 106 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 SNORA20B-201ENST00000384220 132 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 MIR873-201ENST00000401120 77 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 MIR548M-201ENST00000408260 86 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 AC010154.1-201ENST00000425857 269 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.650-201ENST00000459002 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 RNU7-120P-201ENST00000459334 63 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.777-201ENST00000516982 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.771-201ENST00000598668 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.789-201ENST00000622480 102 ntBASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
PCDHB1Q9Y5F3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.54□□□□□ -2
PCDHB1Q9Y5F3 MIR504-201ENST00000385065 83 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms