Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.88□□□□□ -2.27
KCNIP3Q9Y2W7 RNY1P16-201ENST00000363063 111 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 SNORA2.2-201ENST00000365473 135 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.473-201ENST00000384333 102 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-1215P-201ENST00000384441 102 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.557-201ENST00000384680 107 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-376P-201ENST00000384731 106 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 SNORD12-201ENST00000391002 90 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-510P-201ENST00000391239 108 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 RNA5SP482-201ENST00000391269 118 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 RNU5A-5P-201ENST00000411054 116 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 PCNPP5-201ENST00000452246 481 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 AC022493.2-201ENST00000506122 481 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-322P-201ENST00000516010 103 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-1278P-201ENST00000516130 107 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.670-201ENST00000516255 105 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 AL357312.1-201ENST00000603879 298 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 AC012676.2-201ENST00000619258 186 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 U6.115-201ENST00000636045 103 ntBASIC0.87□□□□□ -2.27
KCNIP3Q9Y2W7 AC005592.1-201ENST00000566527 1640 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 MIRLET7C-201ENST00000362160 84 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.2-201ENST00000362330 96 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.267-201ENST00000364679 109 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-117P-201ENST00000365415 107 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 MIR873-201ENST00000401120 77 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 MIR1277-201ENST00000408536 78 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 MIR548F1-201ENST00000408667 84 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-1050P-201ENST00000410388 107 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 RPS3AP52-201ENST00000435639 297 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 SUMO1P2-201ENST00000452524 304 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 AC093852.1-201ENST00000503587 266 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 AL358944.1-201ENST00000528537 144 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 AP002001.1-203ENST00000534002 267 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 MIR4303-201ENST00000581299 66 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 AC093783.1-201ENST00000612976 329 ntBASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.86□□□□□ -2.27
KCNIP3Q9Y2W7 SNORD114-7-201ENST00000362520 77 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.111-201ENST00000363248 100 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-879P-201ENST00000364328 108 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 MIR520G-201ENST00000385064 90 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 MIR548F5-201ENST00000408421 86 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 AC063976.4-201ENST00000421971 163 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 AL353997.1-201ENST00000432936 108 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 AC093850.1-201ENST00000454121 251 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 U8.22-201ENST00000459141 133 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 RNU7-87P-201ENST00000459343 62 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 AC092989.1-201ENST00000481235 277 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 SNORD79.1-201ENST00000516069 84 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-1291P-201ENST00000516591 104 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.708-201ENST00000516950 96 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-548P-201ENST00000517083 115 ntBASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.86-201ENST00000363020 111 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 SNORA7.1-201ENST00000363750 139 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-454P-201ENST00000364292 107 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.339-201ENST00000365325 102 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-318P-201ENST00000384283 103 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.498-201ENST00000384460 102 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 MTND3P8-201ENST00000412909 339 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 HSPE1P13-201ENST00000451143 297 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AC009474.2-201ENST00000451383 136 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 RNU6-625P-201ENST00000459412 107 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 RNU7-12P-201ENST00000516030 62 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AL117336.2-201ENST00000602435 335 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AC009229.3-201ENST00000608056 282 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AC002553.4-201ENST00000616896 331 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 AL353770.2-201ENST00000620024 78 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 MIR3674-201ENST00000636576 68 ntBASIC0.84□□□□□ -2.27
KCNIP3Q9Y2W7 Y_RNA.124-201ENST00000363339 93 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 Y_RNA.361-201ENST00000365515 120 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-601P-201ENST00000384540 107 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 RPL39P39-201ENST00000455840 151 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 snoU13.15-201ENST00000459407 104 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 AC087343.1-201ENST00000477341 475 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 AC011352.1-201ENST00000512300 793 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 SNORA40.9-201ENST00000515895 93 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 RNU6-718P-201ENST00000516166 105 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 AC022868.1-201ENST00000517767 391 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 AF235103.2-201ENST00000525753 346 ntBASIC0.83□□□□□ -2.28
KCNIP3Q9Y2W7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms