Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM33Q9UPN9 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 MIR450A1-201ENST00000362262 91 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 RNA5SP139-201ENST00000364340 117 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 AL133162.1-201ENST00000463228 453 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 AC092185.1-201ENST00000491371 97 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 RNA5SP236-201ENST00000516169 116 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 RNU6-412P-201ENST00000516434 106 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 RNA5SP380-201ENST00000517190 98 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 AC024614.2-201ENST00000577584 372 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 uc_338.28-201ENST00000612082 187 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 AC002064.3-201ENST00000623448 346 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 AC110079.1-202ENST00000635213 138 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 AL049781.1-201ENST00000623195 3585 ntBASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM33Q9UPN9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 AC093831.2-201ENST00000624393 3427 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 Y_RNA.281-201ENST00000364774 94 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 Y_RNA.369-201ENST00000365568 117 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 RNU6-1292P-201ENST00000383856 107 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 MIR520G-201ENST00000385064 90 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 AC025750.2-201ENST00000442609 450 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 AC093663.1-201ENST00000497190 394 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 RNA5SP490-201ENST00000517141 136 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 IGKV1-22-201ENST00000524313 326 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 U6.73-201ENST00000619194 103 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 MIR1248-201ENST00000629190 106 ntBASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM33Q9UPN9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 AC091564.4-201ENST00000533934 2194 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 MIR30B-201ENST00000384850 88 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 AL031121.1-201ENST00000406553 254 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 MICF-203ENST00000432679 129 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 RN7SL75P-201ENST00000461926 281 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 AP001486.1-201ENST00000463339 476 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 MRPS36P2-201ENST00000512569 299 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 RNU6-113P-201ENST00000516653 101 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM33Q9UPN9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM33Q9UPN9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 RNU6-106P-201ENST00000384405 107 ntBASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 AL513477.1-202ENST00000417061 214 ntBASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 Y_RNA.677-201ENST00000516401 85 ntBASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 AC023632.4-201ENST00000517783 191 ntBASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TRIM33Q9UPN9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 SNORA1-201ENST00000384107 130 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 RNA5SP136-201ENST00000410906 107 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 NDUFA4P2-201ENST00000489989 244 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 RNU6-965P-201ENST00000516721 96 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 RNU6-856P-201ENST00000516959 98 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 RNU1-45P-201ENST00000517191 141 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 MIR1254-2-201ENST00000579553 63 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 MIR3129-201ENST00000581095 76 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 UCA1.1-201ENST00000620952 75 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 AC039056.2-201ENST00000622261 511 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 AC080128.1-201ENST00000474389 1917 ntBASIC3.32□□□□□ -1.88
TRIM33Q9UPN9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 SNORD24-201ENST00000383884 75 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 RNU6-546P-201ENST00000383991 107 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 MIR554-201ENST00000384874 96 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 MIR1263-201ENST00000408324 86 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 RN7SL807P-201ENST00000470923 297 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 SNORA4.4-201ENST00000515921 135 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 RNU6-537P-201ENST00000517277 103 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 U2.20-201ENST00000613956 192 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 AC106754.2-201ENST00000623006 233 ntBASIC3.31□□□□□ -1.88
TRIM33Q9UPN9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms