Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 MIR300-201ENST00000401138 83 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 ELOCP21-201ENST00000412558 336 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 AL139156.1-201ENST00000412785 841 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 AL445646.1-201ENST00000431784 216 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 AC009237.7-201ENST00000447357 229 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 RPL23AP3-201ENST00000453844 468 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.56□□□□□ -2
SCAF8Q9UPN6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 RNU2-44P-201ENST00000516795 194 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 AC026271.5-201ENST00000577873 130 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 SNRPGP19-201ENST00000603826 189 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.56□□□□□ -2
SCAF8Q9UPN6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.56□□□□□ -2
SCAF8Q9UPN6 Y_RNA.331-201ENST00000365267 102 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 RNU6-209P-201ENST00000384118 107 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 Y_RNA.785-201ENST00000384290 109 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 RPL23AP36-201ENST00000413895 458 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 RAB28P5-201ENST00000427490 651 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 AC027124.2-201ENST00000428249 105 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 AC245102.2-201ENST00000448956 180 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.55□□□□□ -2
SCAF8Q9UPN6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.55□□□□□ -2
SCAF8Q9UPN6 RNU6-966P-201ENST00000516479 104 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 Y_RNA.700-201ENST00000516806 100 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 RNU6-667P-201ENST00000517186 102 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.55□□□□□ -2
SCAF8Q9UPN6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.55□□□□□ -2
SCAF8Q9UPN6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.55□□□□□ -2
SCAF8Q9UPN6 AC022441.3-201ENST00000605737 136 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 AC037487.3-201ENST00000606668 112 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 AL590240.4-201ENST00000616908 390 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 MIR7111-201ENST00000619751 72 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 AC006001.4-201ENST00000622243 395 ntBASIC2.55□□□□□ -2
SCAF8Q9UPN6 AP006437.1-201ENST00000641440 3685 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 Y_RNA.297-201ENST00000364950 91 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 Y_RNA.418-201ENST00000384029 102 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 SNORA40.19-201ENST00000390846 128 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 SNORA40.18-201ENST00000391200 128 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 AC004866.1-201ENST00000411748 78 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.54□□□□□ -2
SCAF8Q9UPN6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.54□□□□□ -2
SCAF8Q9UPN6 AC004386.2-201ENST00000441858 148 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 AC011753.1-201ENST00000451001 220 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.54□□□□□ -2
SCAF8Q9UPN6 SNORA81.3-201ENST00000517283 198 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 DEFB131C-201ENST00000528817 165 ntBASIC2.54□□□□□ -2
SCAF8Q9UPN6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SCAF8Q9UPN6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCAF8Q9UPN6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCAF8Q9UPN6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
SCAF8Q9UPN6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCAF8Q9UPN6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 MIR410-201ENST00000362222 80 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 SNORA25.1-201ENST00000362326 128 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 Y_RNA.76-201ENST00000362931 109 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 Y_RNA.101-201ENST00000363154 102 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 Y_RNA.117-201ENST00000363294 101 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 Y_RNA.200-201ENST00000364018 102 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 RNU6-740P-201ENST00000364734 105 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 SNORD31B-201ENST00000364977 69 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 SNORA72.2-201ENST00000365028 127 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 Y_RNA.383-201ENST00000383855 97 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 SNORA18.2-201ENST00000383865 132 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 Y_RNA.415-201ENST00000384012 112 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 MIR1298-201ENST00000408783 112 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 POLR2KP2-201ENST00000438155 177 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 MRPS10P1-201ENST00000448483 130 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 AC005042.3-201ENST00000453230 174 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 RNU6-182P-201ENST00000516970 105 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 AP002001.1-203ENST00000534002 267 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 MIR3126-201ENST00000577443 74 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 MIR5006-201ENST00000583027 110 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.53□□□□□ -2
SCAF8Q9UPN6 AC098479.1-201ENST00000609225 154 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 AC004467.1-201ENST00000615678 330 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 MIR1248-201ENST00000629190 106 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCAF8Q9UPN6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.53□□□□□ -2
SCAF8Q9UPN6 AC009487.4-201ENST00000624969 3585 ntBASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 Y_RNA.29-201ENST00000362570 113 ntBASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 Y_RNA.136-201ENST00000363444 102 ntBASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 RNU6-514P-201ENST00000384208 107 ntBASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 SNORA26.9-201ENST00000391322 122 ntBASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 PIGPP3-201ENST00000425307 415 ntBASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 AC108667.1-201ENST00000428618 249 ntBASIC2.52□□□□□ -2.01
SCAF8Q9UPN6 MTCO1P5-201ENST00000433573 344 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms