Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.93□□□□□ -1.78
COL17A1Q9UMD9 AC004467.1-201ENST00000615678 330 ntBASIC3.93□□□□□ -1.78
COL17A1Q9UMD9 AC013791.1-201ENST00000616619 62 ntBASIC3.93□□□□□ -1.78
COL17A1Q9UMD9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.93□□□□□ -1.78
COL17A1Q9UMD9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
COL17A1Q9UMD9 RNY1P10-201ENST00000363268 113 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 RNU6-1336P-201ENST00000383886 109 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 RNU6-969P-201ENST00000383900 105 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 SNORA29-201ENST00000384183 140 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 SNORA20B-201ENST00000384220 132 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 MIR489-201ENST00000384923 84 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 RNU6-440P-201ENST00000390882 105 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 MLLT10P1-201ENST00000418346 262 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 YPEL5P1-201ENST00000419731 367 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 RPL39P29-201ENST00000447779 157 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 SNRPGP7-201ENST00000469016 106 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 MIR4781-201ENST00000585250 76 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 U4.3-201ENST00000621047 82 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 AC138915.1-201ENST00000565427 1685 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 RNU6-1141P-201ENST00000364520 107 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 Y_RNA.329-201ENST00000365209 107 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 RNU6-728P-201ENST00000365375 104 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 SNORA26.5-201ENST00000391215 123 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 RPL23AP95-201ENST00000426806 265 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 ZNF861P-201ENST00000588126 639 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 MIR3529-201ENST00000637713 78 ntBASIC3.92□□□□□ -1.78
COL17A1Q9UMD9 CENPCP1-201ENST00000533085 2578 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 RNU1-100P-201ENST00000365255 165 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 SNORA80E-201ENST00000384744 137 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 MIR544A-201ENST00000384855 91 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 Y_RNA.617-201ENST00000410920 90 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 AC234781.5-201ENST00000508429 271 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 RNU6-412P-201ENST00000516434 106 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 RNA5SP309-201ENST00000516670 106 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 PRELID2P1-201ENST00000552837 301 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 AC091932.3-201ENST00000624223 323 ntBASIC3.91□□□□□ -1.78
COL17A1Q9UMD9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL17A1Q9UMD9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 AC092268.1-201ENST00000342691 405 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.220-201ENST00000364244 109 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 RNU6-1296P-201ENST00000383879 107 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 MIR181B1-201ENST00000385240 110 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 RNU6-788P-201ENST00000390967 104 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 RNU6-159P-201ENST00000391080 106 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 AC138623.1-201ENST00000418060 216 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 RPL26P9-201ENST00000457466 433 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 RNA5SP54-201ENST00000516951 92 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 AC021231.3-201ENST00000558497 370 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL17A1Q9UMD9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.140-201ENST00000363474 103 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.163-201ENST00000363702 113 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 RNU6-1048P-201ENST00000364054 107 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.281-201ENST00000364774 94 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 SNORD32A-201ENST00000364805 84 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 Y_RNA.346-201ENST00000365385 112 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 AL606845.1-201ENST00000404881 255 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 AL358075.3-201ENST00000426289 226 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 AC078809.1-201ENST00000427601 140 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 AP000873.1-201ENST00000463987 400 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 RPS26P45-201ENST00000471748 340 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 RN7SKP19-201ENST00000516016 252 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 RNA5SP380-201ENST00000517190 98 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 AC012640.5-201ENST00000623897 319 ntBASIC3.89□□□□□ -1.79
COL17A1Q9UMD9 MTND5P18-201ENST00000445624 1801 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 SNORA64-201ENST00000384674 134 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 RN7SKP61-201ENST00000410642 295 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 AL135790.2-201ENST00000437701 267 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 RNU7-170P-201ENST00000459303 61 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 RNU6-625P-201ENST00000459412 107 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 AL391903.3-201ENST00000612158 163 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 AC025166.1-201ENST00000612411 163 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 AL078604.3-201ENST00000615580 211 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 AC009831.4-201ENST00000620744 325 ntBASIC3.88□□□□□ -1.79
COL17A1Q9UMD9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms