Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 MIR3942-201ENST00000585264 109 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 AC068137.4-201ENST00000638485 296 ntBASIC0.82□□□□□ -2.28
NUP50Q9UKX7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
NUP50Q9UKX7 RNU4-38P-201ENST00000364472 129 ntBASIC0.81□□□□□ -2.28
NUP50Q9UKX7 SNORD12-201ENST00000391002 90 ntBASIC0.81□□□□□ -2.28
NUP50Q9UKX7 AL451046.2-201ENST00000403074 277 ntBASIC0.81□□□□□ -2.28
NUP50Q9UKX7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.81□□□□□ -2.28
NUP50Q9UKX7 AC091021.1-201ENST00000468051 388 ntBASIC0.81□□□□□ -2.28
NUP50Q9UKX7 OR9P1P-201ENST00000496431 281 ntBASIC0.81□□□□□ -2.28
NUP50Q9UKX7 MIR4273-201ENST00000582824 84 ntBASIC0.81□□□□□ -2.28
NUP50Q9UKX7 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
NUP50Q9UKX7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.81□□□□□ -2.28
NUP50Q9UKX7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
NUP50Q9UKX7 AC005592.1-201ENST00000566527 1640 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 RNU6-1090P-201ENST00000364065 94 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 RNU6-281P-201ENST00000384212 103 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 SNORA20B-201ENST00000384220 132 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 MIR548J-201ENST00000408833 112 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
NUP50Q9UKX7 MTCO3P19-201ENST00000415864 321 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 MTND3P23-201ENST00000431980 347 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 RNU6-322P-201ENST00000516010 103 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.683-201ENST00000516508 93 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 AL590705.4-201ENST00000532209 134 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 AC024614.3-201ENST00000637860 256 ntBASIC0.8□□□□□ -2.28
NUP50Q9UKX7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
NUP50Q9UKX7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NUP50Q9UKX7 RNU6-222P-201ENST00000362438 107 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.41-201ENST00000362646 102 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 RNU6-595P-201ENST00000363944 107 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 RNY1-201ENST00000364228 113 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.267-201ENST00000364679 109 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 RNU6-596P-201ENST00000365395 98 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 SNORA2.2-201ENST00000365473 135 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 Y_RNA.559-201ENST00000384686 107 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.79□□□□□ -2.28
NUP50Q9UKX7 RPS26P48-201ENST00000491713 339 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 AC022493.2-201ENST00000506122 481 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 AC018710.1-201ENST00000506509 158 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 RNU2-56P-201ENST00000516826 190 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 AL121579.1-201ENST00000555129 305 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 RPL21P9-201ENST00000556149 474 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 AC090617.10-201ENST00000624308 134 ntBASIC0.79□□□□□ -2.28
NUP50Q9UKX7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
NUP50Q9UKX7 ZNF299P-201ENST00000406845 1804 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 SNORA1B-201ENST00000362535 133 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 RNU6-1059P-201ENST00000363752 98 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 RNU6-1114P-201ENST00000516022 107 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 RNU7-12P-201ENST00000516030 62 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 RNU6-273P-201ENST00000516937 96 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.78□□□□□ -2.28
NUP50Q9UKX7 AP002001.1-203ENST00000534002 267 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 AC093023.1-201ENST00000547375 507 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 AC091178.2-201ENST00000584401 117 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 AF250324.2-201ENST00000608299 610 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 MIR6515-201ENST00000619843 57 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.78□□□□□ -2.28
NUP50Q9UKX7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AC008163.1-202ENST00000636004 2889 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 RNU6-407P-201ENST00000365280 104 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 RNU6-969P-201ENST00000383900 105 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 SNORD116-2-201ENST00000384274 95 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 SNORA80D-201ENST00000384488 135 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 SNORD116-6-201ENST00000384711 96 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 RNU1-139P-201ENST00000391307 165 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 USMG5P1-201ENST00000425964 177 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 USP9YP16-201ENST00000430287 407 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AC104332.1-201ENST00000440471 797 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.77□□□□□ -2.29
NUP50Q9UKX7 MTCO2P7-201ENST00000446518 666 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 USP9YP23-201ENST00000455085 407 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 RPL39P39-201ENST00000455840 151 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AC046134.1-201ENST00000514454 666 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 RNU6-506P-201ENST00000516553 94 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 RNU7-28P-201ENST00000516759 62 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 RNU6-341P-201ENST00000516973 96 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 MTND2P38-201ENST00000522536 667 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AL117336.2-201ENST00000602435 335 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AL357312.1-201ENST00000603879 298 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 AC103591.3-201ENST00000608684 209 ntBASIC0.77□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.48-201ENST00000362710 103 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.106-201ENST00000363189 100 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.490-201ENST00000384413 102 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 MIR613-201ENST00000385248 95 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 RNU6-1148P-201ENST00000410992 104 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 AC018865.2-201ENST00000423631 129 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 RNA5SP20-201ENST00000515976 84 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 RNU6-864P-201ENST00000516256 108 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 RNU6-1291P-201ENST00000516591 104 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 Y_RNA.706-201ENST00000516933 99 ntBASIC0.76□□□□□ -2.29
NUP50Q9UKX7 AC109635.3-201ENST00000529536 185 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms