Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6-588P-201ENST00000410281 105 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AC098592.1-201ENST00000419352 333 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AL929288.2-201ENST00000446368 407 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 SNORA31.14-201ENST00000516728 116 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 MTCO3P15-201ENST00000526563 574 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 AC121247.2-201ENST00000604776 136 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 SNORA70.25-201ENST00000612741 95 ntBASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.07□□□□□ -2.58
CHD7Q9P2D1 SNORD114-29-201ENST00000364819 70 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AL512286.1-201ENST00000439244 400 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 TMEM251P1-201ENST00000503717 318 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 PRDX4P1-201ENST00000507189 574 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AL157687.1-201ENST00000554853 619 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 SNORA59B-202ENST00000578183 701 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 MIR4275-201ENST00000636486 87 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AC006927.4-201ENST00000639187 543 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 SNORD115-27-201ENST00000364430 82 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 MIR1303-201ENST00000408625 86 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 USP9YP12-201ENST00000450481 570 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AC104073.1-201ENST00000451988 151 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 RPL37P6-201ENST00000460682 294 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 RNU6-123P-201ENST00000516163 102 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AC245014.2-201ENST00000603689 287 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AC034229.4-201ENST00000607861 441 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AC244669.1-204ENST00000621564 178 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 RNY3P9-201ENST00000384727 106 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 ELOCP14-201ENST00000428070 331 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 ELOCP7-201ENST00000439968 331 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 GMFBP1-201ENST00000467831 427 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.08□□□□□ -2.58
CHD7Q9P2D1 RNU6-655P-201ENST00000362858 107 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 MIR518F-201ENST00000384973 87 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 MTCO2P33-201ENST00000402100 465 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 SNORD110-201ENST00000408189 75 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 AC092447.3-201ENST00000426027 686 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 MTATP6P26-201ENST00000445926 662 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 AC022217.4-201ENST00000604389 163 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 RNU6-511P-201ENST00000363496 107 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 MIR891A-201ENST00000401237 79 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 RNU6-293P-201ENST00000411259 106 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 RNU7-55P-201ENST00000459426 62 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 AL596327.1-201ENST00000603629 213 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 AC018889.1-201ENST00000605372 397 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 MIR6818-201ENST00000621576 65 ntBASIC-1.09□□□□□ -2.58
CHD7Q9P2D1 RNU6-535P-201ENST00000384722 107 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 RNU4-83P-201ENST00000410863 133 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 AC068135.1-201ENST00000446164 246 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 SNORA74.3-201ENST00000517108 154 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 RNU7-156P-201ENST00000517214 74 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 RNU6-840P-201ENST00000517275 65 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 AP001189.2-201ENST00000527320 189 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 AL445435.1-201ENST00000604232 665 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 SNORA2.2-201ENST00000365473 135 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 RNU6-441P-201ENST00000384545 106 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 MT-TN-201ENST00000387400 73 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 AC079395.1-201ENST00000510981 262 ntBASIC-1.1□□□□□ -2.59
CHD7Q9P2D1 RNU6-704P-201ENST00000364162 103 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 SNORA32.2-201ENST00000384049 122 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 RNU6-784P-201ENST00000384330 106 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 SNORD28-201ENST00000384706 75 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 MIR649-201ENST00000384843 97 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 MIR526A1-201ENST00000384897 85 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 RNU7-12P-201ENST00000516030 62 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 MRPS36P5-201ENST00000551909 298 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 AC078795.2-201ENST00000602835 1252 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 AL355598.1-201ENST00000604169 202 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 AC091965.4-201ENST00000607691 587 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 AC074085.1-201ENST00000413598 418 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 AL606517.1-201ENST00000446914 387 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 RNU7-41P-201ENST00000515917 61 ntBASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.11□□□□□ -2.59
CHD7Q9P2D1 AC020891.4-201ENST00000605745 93 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms