Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORD81.1-201ENST00000363064 77 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 RNU6-324P-201ENST00000363957 106 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 Y_RNA.222-201ENST00000364264 102 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 RNA5SP465-201ENST00000391195 109 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.38□□□□□ -2.03
COL20A1Q9P218 AC060773.1-201ENST00000421698 310 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 AC010154.1-201ENST00000425857 269 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 AC024067.1-201ENST00000426199 223 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 MTND4LP30-201ENST00000454092 297 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 SNORD65B-201ENST00000459126 73 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 AC011406.1-201ENST00000512440 370 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL20A1Q9P218 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.38□□□□□ -2.03
COL20A1Q9P218 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
COL20A1Q9P218 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.38□□□□□ -2.03
COL20A1Q9P218 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 AC037487.3-201ENST00000606668 112 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 SDR42E1P4-201ENST00000620894 481 ntBASIC2.38□□□□□ -2.03
COL20A1Q9P218 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
COL20A1Q9P218 AC092881.1-201ENST00000638218 2733 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 SNORA3A-201ENST00000364113 130 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 Y_RNA.518-201ENST00000384552 113 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 U3.40-201ENST00000408706 208 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 RPL21P38-201ENST00000418090 167 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 POLR2KP2-201ENST00000438155 177 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.37□□□□□ -2.03
COL20A1Q9P218 HMGB3P17-201ENST00000504195 649 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.37□□□□□ -2.03
COL20A1Q9P218 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.37□□□□□ -2.03
COL20A1Q9P218 MIR3169-201ENST00000578032 83 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 MIR3149-201ENST00000584629 83 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 AC005786.1-201ENST00000588553 154 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 AC078899.2-201ENST00000595282 212 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 AP000942.4-201ENST00000604811 241 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 AC005828.6-201ENST00000606610 232 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 AL353149.1-201ENST00000610667 244 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 Y_RNA.783-201ENST00000613546 102 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 AC245884.12-201ENST00000615364 59 ntBASIC2.37□□□□□ -2.03
COL20A1Q9P218 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.37□□□□□ -2.03
COL20A1Q9P218 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.36□□□□□ -2.03
COL20A1Q9P218 snoU2-30.2-201ENST00000362805 70 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 Y_RNA.193-201ENST00000363979 102 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 SNORD115-30-201ENST00000364117 82 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 RNU6-290P-201ENST00000365212 101 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 Y_RNA.376-201ENST00000365638 108 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 Y_RNA.512-201ENST00000384518 102 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 RNU11-3P-201ENST00000391111 133 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 SNORA53-201ENST00000391141 249 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 RNU6-1199P-201ENST00000411249 104 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 AC016909.1-201ENST00000415916 166 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.36□□□□□ -2.03
COL20A1Q9P218 AC098869.1-201ENST00000481627 292 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 AL137100.2-201ENST00000555786 315 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 MIR4529-201ENST00000578110 78 ntBASIC2.36□□□□□ -2.03
COL20A1Q9P218 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.36□□□□□ -2.03
COL20A1Q9P218 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
COL20A1Q9P218 AC131280.1-202ENST00000624067 4211 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 Y_RNA.84-201ENST00000363011 104 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 snoU2_19.2-201ENST00000363024 80 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 SNORA67.1-201ENST00000364749 141 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 RNU6-702P-201ENST00000364982 107 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.35□□□□□ -2.03
COL20A1Q9P218 SNORA20B-201ENST00000384220 132 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 Y_RNA.461-201ENST00000384263 103 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 RNU6-472P-201ENST00000384299 107 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 SNORA80E-201ENST00000384744 137 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 MIR515-2-201ENST00000384883 83 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 MIR515-1-201ENST00000384884 83 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 RNU6-1248P-201ENST00000391096 64 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 MIR873-201ENST00000401120 77 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 AL031003.1-201ENST00000404229 172 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 RNU6-710P-201ENST00000410424 105 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 BX510359.4-201ENST00000423750 193 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 HMGN2P34-201ENST00000437647 269 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 HSPE1P25-201ENST00000455484 251 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 TRBVB-201ENST00000477100 408 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 Y_RNA.668-201ENST00000516233 93 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 RNU6-1041P-201ENST00000516254 102 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 AC127459.3-201ENST00000624328 466 ntBASIC2.35□□□□□ -2.03
COL20A1Q9P218 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.35□□□□□ -2.03
COL20A1Q9P218 CENPCP1-201ENST00000533085 2578 ntBASIC2.34□□□□□ -2.03
COL20A1Q9P218 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL20A1Q9P218 AL356292.1-201ENST00000283110 373 ntBASIC2.34□□□□□ -2.03
COL20A1Q9P218 Y_RNA.383-201ENST00000383855 97 ntBASIC2.34□□□□□ -2.03
COL20A1Q9P218 Y_RNA.569-201ENST00000384749 103 ntBASIC2.34□□□□□ -2.03
COL20A1Q9P218 RNU6-1203P-201ENST00000410703 110 ntBASIC2.34□□□□□ -2.03
COL20A1Q9P218 AL591806.2-201ENST00000433122 173 ntBASIC2.34□□□□□ -2.03
COL20A1Q9P218 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.34□□□□□ -2.03
COL20A1Q9P218 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.34□□□□□ -2.03
COL20A1Q9P218 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.34□□□□□ -2.03
COL20A1Q9P218 RNU6-570P-201ENST00000517051 105 ntBASIC2.34□□□□□ -2.03
COL20A1Q9P218 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
COL20A1Q9P218 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.34□□□□□ -2.03
COL20A1Q9P218 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.34□□□□□ -2.03
COL20A1Q9P218 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.34□□□□□ -2.03
COL20A1Q9P218 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.34□□□□□ -2.03
COL20A1Q9P218 AC245060.5-201ENST00000610778 3293 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms