Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AC245047.8-201ENST00000456455 284 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 MIR622-201ENST00000638396 96 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
UBP1Q9NZI7 FAM35CP-201ENST00000554755 2470 ntBASIC3.07□□□□□ -1.92
UBP1Q9NZI7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.06□□□□□ -1.92
UBP1Q9NZI7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBP1Q9NZI7 RNU6-187P-201ENST00000384139 106 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 MIR483-201ENST00000385070 76 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 RNU6-239P-201ENST00000390990 99 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 AL512604.1-201ENST00000404812 257 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 AC244505.4-201ENST00000434905 287 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 SSXP5-201ENST00000443473 287 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.06□□□□□ -1.92
UBP1Q9NZI7 RN7SL636P-201ENST00000497504 294 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 RNU6-453P-201ENST00000516819 85 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 MTND5P41-201ENST00000517498 206 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 MIR3200-201ENST00000580767 85 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 AC007229.1-201ENST00000590455 412 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.06□□□□□ -1.92
UBP1Q9NZI7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
UBP1Q9NZI7 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
UBP1Q9NZI7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.06□□□□□ -1.92
UBP1Q9NZI7 AC073346.2-201ENST00000624724 2058 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
UBP1Q9NZI7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.05□□□□□ -1.92
UBP1Q9NZI7 MIR520G-201ENST00000385064 90 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 RNA5SP274-201ENST00000410484 108 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 RNU6-383P-201ENST00000410864 94 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.05□□□□□ -1.92
UBP1Q9NZI7 AC107027.2-201ENST00000512197 115 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 RNU7-99P-201ENST00000516271 62 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 AC007536.1-201ENST00000533382 349 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.05□□□□□ -1.92
UBP1Q9NZI7 AC026271.5-201ENST00000577873 130 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 MIR2681-201ENST00000581814 105 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 MIR3651-201ENST00000630427 90 ntBASIC3.05□□□□□ -1.92
UBP1Q9NZI7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
UBP1Q9NZI7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.05□□□□□ -1.92
UBP1Q9NZI7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.04□□□□□ -1.92
UBP1Q9NZI7 RNU6-728P-201ENST00000365375 104 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 SNORD50.2-201ENST00000365465 70 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 SNORD116-18-201ENST00000383961 92 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 MIR515-2-201ENST00000384883 83 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 MIR515-1-201ENST00000384884 83 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 MIR613-201ENST00000385248 95 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 AL606845.1-201ENST00000404881 255 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 RN7SKP101-201ENST00000411376 320 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.04□□□□□ -1.92
UBP1Q9NZI7 RPS15AP28-201ENST00000435088 386 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 MIR3910-1-201ENST00000580936 111 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.04□□□□□ -1.92
UBP1Q9NZI7 AL359075.3-201ENST00000613288 217 ntBASIC3.04□□□□□ -1.92
UBP1Q9NZI7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.03□□□□□ -1.92
UBP1Q9NZI7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UBP1Q9NZI7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.92
UBP1Q9NZI7 SNORA71.1-201ENST00000364523 117 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 RNU6-1072P-201ENST00000384703 107 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 RNU6-417P-201ENST00000384712 107 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 RNU6-443P-201ENST00000384780 107 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 MIR1262-201ENST00000408276 93 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 AC063976.3-201ENST00000426849 329 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 AC018634.1-201ENST00000437554 401 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.03□□□□□ -1.92
UBP1Q9NZI7 UBBP3-201ENST00000445497 241 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 RPS4XP11-201ENST00000446897 772 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 SNORA74D-201ENST00000516404 141 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 RN7SKP282-201ENST00000516824 299 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.03□□□□□ -1.92
UBP1Q9NZI7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.03□□□□□ -1.92
UBP1Q9NZI7 MIR338-201ENST00000636369 67 ntBASIC3.03□□□□□ -1.92
UBP1Q9NZI7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
UBP1Q9NZI7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
UBP1Q9NZI7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
UBP1Q9NZI7 RNU4-41P-201ENST00000364426 143 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 RNU6-136P-201ENST00000384663 107 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 BMS1P22-201ENST00000414726 313 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 TMSB4XP3-201ENST00000445144 114 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 AL121914.1-201ENST00000450188 156 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 ATP5J2P3-201ENST00000451550 258 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 RN7SKP43-201ENST00000516173 320 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 RNU6-1041P-201ENST00000516254 102 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 RNU7-121P-201ENST00000516604 62 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 AC004832.5-201ENST00000608677 401 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.02□□□□□ -1.93
UBP1Q9NZI7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.02□□□□□ -1.93
UBP1Q9NZI7 SNORD114-6-201ENST00000364393 72 ntBASIC3.01□□□□□ -1.93
UBP1Q9NZI7 SNORA9-201ENST00000384215 133 ntBASIC3.01□□□□□ -1.93
UBP1Q9NZI7 MT-TT-201ENST00000387460 66 ntBASIC3.01□□□□□ -1.93
UBP1Q9NZI7 MIR1278-201ENST00000408753 81 ntBASIC3.01□□□□□ -1.93
UBP1Q9NZI7 RNU6-1186P-201ENST00000410429 97 ntBASIC3.01□□□□□ -1.93
UBP1Q9NZI7 AC092185.1-201ENST00000491371 97 ntBASIC3.01□□□□□ -1.93
UBP1Q9NZI7 RN7SKP57-201ENST00000517248 293 ntBASIC3.01□□□□□ -1.93
UBP1Q9NZI7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.01□□□□□ -1.93
UBP1Q9NZI7 AC011604.1-201ENST00000545978 196 ntBASIC3.01□□□□□ -1.93
UBP1Q9NZI7 MIR8057-201ENST00000620957 69 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms