Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 MRPL42P3-201ENST00000401492 326 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 USP9YP30-201ENST00000430729 455 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 MTND1P34-201ENST00000438556 671 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 RNU6-329P-201ENST00000459618 107 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 RPL39P38-201ENST00000467018 153 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 AC010598.1-201ENST00000510378 103 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 Y_RNA.683-201ENST00000516508 93 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 MIR3664-201ENST00000579074 99 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 AL929325.1-201ENST00000603096 117 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 AC100812.1-201ENST00000607622 580 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 AL021879.1-201ENST00000611756 288 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 AC040896.1-201ENST00000613819 479 ntBASIC1.08□□□□□ -2.24
HOXC10Q9NYD6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 MIR410-201ENST00000362222 80 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 RPL30P16-201ENST00000419341 429 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 AL139396.1-201ENST00000421137 167 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 MTND3P23-201ENST00000431980 347 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 SNORD65B-201ENST00000459126 73 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 MTND5P5-201ENST00000503764 376 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 AC103851.1-201ENST00000506833 274 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 RN7SKP88-201ENST00000516847 250 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 RNU1-54P-201ENST00000517181 120 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 CYP3A137P-201ENST00000562436 69 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 AC090617.3-201ENST00000573670 475 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 AC018638.8-201ENST00000588755 281 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 AL022345.2-201ENST00000606307 135 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 7SK.8-201ENST00000612110 250 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 7SK.11-201ENST00000615477 250 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 AL513423.1-201ENST00000621695 132 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 7SK.13-201ENST00000622040 250 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 MIR3662-201ENST00000637030 95 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 AC100810.6-201ENST00000638068 285 ntBASIC1.07□□□□□ -2.24
HOXC10Q9NYD6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 Y_RNA.453-201ENST00000384223 109 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 RNU6-440P-201ENST00000390882 105 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 EIF1P2-201ENST00000428233 350 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AL589823.1-201ENST00000429577 183 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 RNU7-34P-201ENST00000459394 64 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AC046134.1-201ENST00000514454 666 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 MIR5000-201ENST00000577717 103 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AC018462.2-201ENST00000605375 395 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AC012557.2-201ENST00000605919 418 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 AL365434.2-201ENST00000607979 234 ntBASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HOXC10Q9NYD6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 Y_RNA.6-201ENST00000362350 114 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 RNU6-727P-201ENST00000363592 107 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 RNU6-1059P-201ENST00000363752 98 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 Y_RNA.184-201ENST00000363884 108 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 MIR329-1-201ENST00000385028 80 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 RNU11-5P-201ENST00000391216 129 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 RNU6-510P-201ENST00000391239 108 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 MIR548K-201ENST00000408406 116 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 MIR1277-201ENST00000408536 78 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 MTCO3P19-201ENST00000415864 321 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 POLR2J4-204ENST00000418424 324 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 AC005002.2-201ENST00000438228 269 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 MRPS10P1-201ENST00000448483 130 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 AC011352.1-201ENST00000512300 793 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 AC026782.1-201ENST00000512952 449 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 SNORD116-28-201ENST00000516123 91 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 Y_RNA.706-201ENST00000516933 99 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 AC091144.1-201ENST00000519573 138 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 AC105029.1-201ENST00000520250 669 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 APOOP3-201ENST00000536787 586 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 AC002553.4-201ENST00000616896 331 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 AC018630.2-201ENST00000534866 2403 ntBASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HOXC10Q9NYD6 RNU6-1264P-201ENST00000383891 107 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 RNU6-1145P-201ENST00000384246 107 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 MIR190B-201ENST00000401119 79 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 AL034345.1-201ENST00000407768 123 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 AC245047.3-201ENST00000429428 127 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 USP9YP16-201ENST00000430287 407 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 USP9YP23-201ENST00000455085 407 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 AC074133.1-201ENST00000515696 183 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 RNU4-49P-201ENST00000516080 140 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 CBX3P8-201ENST00000532412 525 ntBASIC1.04□□□□□ -2.24
HOXC10Q9NYD6 AL513534.2-201ENST00000603836 250 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms